Scomber scombrus (Atlantic mackerel): 133996213
Help
Entry
133996213 CDS
T10651
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Membrane trafficking [BR:
ssco04131
]
Protein recycling
Others
EARP complex
133996213 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
133996213 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133996213
NCBI-ProteinID:
XP_062291776
LinkDB
All DBs
Position
16:1923069..2065554
Genome browser
AA seq
699 aa
AA seq
DB search
MAYLQDETTDGEIPNLNLGELDLTTDEFILDEVDIHIQANLEDDLVKEALKTGVDLRQYS
KQVETELQRIEQASIKDYIKESQNIALLHNQITACDSILERMEGMLSGFQSDLSSISSEI
QTLQQQSVSMNVRLKNRQAVRSHLSQLVDELVVPGTMISTILDSPVTEQEFLEQLHELNN
KINFAKELSFRETLACSDIQDIVDRLKLKAVSKIREFILQKIYSFRKPMTNYQIPQNTLL
KYRFFYQFLLANERTVAKEIRDEYVDTMSKIYYSYFKSYSGRLLKVQYEEVADKDDLMGV
EDTAKKGFFSKPSLKSRNTIFTVGQRGAILSPAELEGPILVPHTAQRGDSRYPYETLFRS
QHYALLDNGCREFLFLSDFFMVTGNSAFDLFNSIMGKTLSMFLKSMSTYVSDCYDSIAVF
LCIHIILRFRAITAKRNIPALDKYWEAVLELLWPRFELILELNIISIRNTDPQKLGVLDT
RPHYITRRYAEFSSAIVSINQTFPNERTNTLLGQLQIEVENFVLKMAAEFPSRRDQLIFL
INNYDMLLSVLMERAADDSKEVEGFQQLLLARTQEFIEEILSPPFGGMIAFVKEAEALLE
KGQLDRLKNEEARITQLIRGFSSTWKQSVESMSQDVMRSFTNFKNGTSIIQGALTQLIQY
YHGFHKVLNQPSFRSLAVRSELINLHHLMVEVKKHKPNF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatttacaggatgagacgactgacggagaaatcccaaacctgaacctgggagag
ctggacctcactactgatgagttcatcctggatgaagtggacattcacattcaggcgaac
ctggaggacgacctggtgaaagaggctctgaaaacgggcgttgatctccgtcagtactcc
aaacaggtggagacggagctgcagaggatcgaacaggcctccatcaaagactacatcaaa
gagagtcagaacatcgctctgctgcacaatcagatcaccgcctgtgactctatactggag
cgcatggaggggatgctgagcggcttccagagcgacttgtcctccatcagcagtgagatc
cagactctgcagcagcagtcggtcagcatgaacgtccgtctgaagaaccggcaggcagtc
cgaagccacctgagccagctggtggacgagctggtggtgcctggaaccatgatctccacc
atcctggacagccccgtgacagaacaggagtttctggagcagcttcacgaactcaacaac
aagatcaacttcgccaaagagttgagcttcagagagacgctggcgtgctccgacatccag
gacatcgtggaccgactcaaactgaaggcggtgtcaaagatccgagagttcatccttcag
aagatttactcgttcaggaagccgatgaccaactatcagatcccacaaaacacgctgctg
aaatacaggtttttctatcagtttcttttagccaatgagagaacggtagcgaaggagatc
agagacgagtacgttgatacgatgagtaaaatctactatagttacttcaagtcgtacagc
ggccgactgctcaaagttcagtacgaagaagtcgctgataaagacgatctgatgggagta
gaagacacagcaaagaaaggtttcttctccaaaccgtctctgaagagcaggaacaccatc
ttcactgttggccagcggggggcgatactgagtcctgctgagctggaagggccgatcctg
gttcctcacacggctcagagaggagacagcaggtatccgtatgagacgttgttccgcagt
cagcactacgctctgctggataacggctgcagagagttcctcttcctgtccgacttcttc
atggtgacgggaaactcggccttcgacctcttcaacagcatcatgggaaaaactctcagc
atgttcctgaagagtatgtccacgtatgtgtccgactgctacgacagcatcgccgtcttc
ctctgtattcacatcatcctgagattcagagccatcacagccaagaggaacatccccgct
ttagacaagtactgggaggctgtgttagagctgctgtggccgaggttcgagttgattctg
gagctgaacatcatcagcatccgaaacacagaccctcagaaactgggagtactggacacc
agacctcactacatcacccgtcgctacgctgagttctcgtcggccatcgtcagcatcaac
cagacgtttcccaacgagagaaccaacactctgctgggacagctgcagatcgaggtggaa
aactttgttctgaagatggcggcagagtttccctccaggagagatcagctgatcttcctc
atcaacaactacgacatgctgctcagcgtcctcatggagagggcagcagacgacagcaaa
gaggtggaaggtttccaacagctgctgctggccaggacgcaggagttcatcgaggagatt
ctgtctcctccgttcggggggatgatcgccttcgtgaaggaggccgaggctctgctggag
aaagggcaactcgaccggctgaagaacgaagaagctcggatcactcagctcattcgaggt
ttttccagcacgtggaagcagtcggtggagtcgatgagtcaggacgtgatgagatctttc
accaactttaaaaacgggaccagcatcattcagggcgctctgactcagctcatccagtac
taccacggcttccacaaggtcctgaaccagccgagcttccgcagcctggccgtccgctcc
gagctcatcaacctgcatcacctcatggtcgaagtgaagaaacacaaacctaacttctaa
DBGET
integrated database retrieval system
