Scomber scombrus (Atlantic mackerel): 133996215
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Entry
133996215 CDS
T10651
Symbol
gga3a
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3a
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
133996215 (gga3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133996215 (gga3a)
Membrane trafficking [BR:
ssco04131
]
Endosome - Golgi transport
Others
GGA
133996215 (gga3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
CRA
Motif
Other DBs
NCBI-GeneID:
133996215
NCBI-ProteinID:
XP_062291783
LinkDB
All DBs
Position
2:15380299..15390851
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AA seq
780 aa
AA seq
DB search
MADDGESLESWLNKATNPSNRQEDWEYIMGFCDQINKELEGPQISVRLLGHKIQSPQEWE
ALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDKVSERVKTKVIEMLYSW
TVSLPDEAKICEAYQMLKTQGIVLVDPEIPLDATLIPSPSPRPKNPVFDDEEKSRRLSLL
LKSKKPEDLQEANRLIKNMVKEDEVRAQKATKQKSTLEAANNSVKLLNEMLAYFSPEDST
DGDKELIRDLYGDCDKLRQTVFQLATETEDNDSNLGDILQASDDLSHVINSYKKIVEGQT
INGETEEAQQTRSAVNKGPGRTTQSEILIDLVGLDVQSPSPPEQQPPTSSISIPADLLCG
TAATEPQSSSTNALSAALSLLDEELLSLGLNEPAPVSSKSTAPTHVNLSNHLQPIQDSSK
DLELFDTTSPPAPAFSTSSFFPCTLSATVTSVSPTKSSATASALSFSGAVFSTPSVSTQS
VSVTSGSQQSVSSGLTFTAPAALPQSYNAVLSVPSATTVTQQQASAAAGPSQSASPSFNH
NLQDLALLDVSSPKNTPGAMDFGSLLAKCEDLHDPFTLLSSIGGTYTTSQPSLIGGIPGG
STIPPAKCQADDSPLLRSLSPILPHSQPSPGSGEEVSLANVFVPLDAIKPSKVCPVTAYD
KNGVRLLLHFATDCPPGRPDVLVMVASMLNTAPLPVRNIVLQAAVPKTMKVRLQSPSGTE
LAPFNPILPPAASTQVMLLANPLKEIVRMRYKLTFTLGEQPHTEVGEVNEFPPADRWGAL
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgatggagagtcgctggagtcctggctcaacaaggccactaacccttccaac
agacaggaagactgggagtatatcatgggattctgtgaccaaatcaataaagagctagag
ggcccacaaatatcggttcgacttttgggtcataagattcagtcccctcaggaatgggag
gcgttacaagcattaacggttctggaggcttgtatgaagaactgtgggcgaaggtttcac
aatgaagttgggaaatttaggtttttaaacgaactaatcaaagtggtttctccaaaatat
ctaggagacaaagtatcagagagggtgaagacgaaagtgattgagatgctgtacagttgg
actgtgtctctaccagatgaagcaaagatctgtgaagcctatcagatgctgaagacacag
ggcattgttttagttgacccagaaatccctctggatgccacattaataccgtcaccttct
ccgagacccaaaaatcctgtgtttgatgatgaggagaagagcaggagattgtcactgcta
ctgaagagcaaaaagcctgaagatctgcaagaggccaatcggctcatcaagaacatggtt
aaggaggatgaggtgagagcacagaaagcaacaaaacaaaaaagcacactggaggcagct
aacaacagcgtcaaactccttaacgagatgcttgcttacttcagcccggaagactccact
gacggtgacaaggaactcattagggatttatatggtgattgtgacaagcttagacaaaca
gtgtttcagctcgctactgagactgaggataatgacagcaacttgggagacattctgcag
gccagcgatgacctctcccatgtcattaattcttataagaagattgtggaaggacagacc
atcaacggagagactgaagaagcacaacaaacaagatcagcagttaacaaaggccccggc
cgcacaactcagtcagagattctgattgacctagtgggtctggacgtccagagcccctct
ccaccagagcagcaaccccccacatcttctatatctattccagctgacctgctgtgtggg
accgctgccactgaacctcagtcttcaagcacaaacgcactctctgcagcactatctctg
ctggatgaagagctgctgtctttaggcctcaatgaacccgctcccgtttcaagtaaatca
acagcaccaacacatgtaaacctgagcaatcatttacaaccaatacaggattccagtaag
gatttggaactttttgacactacttcacctccagctcctgcattctcgacatcatcattt
tttccatgcaccctctctgcaacagtaacttcagttagccccaccaagtcttcagcaact
gcctctgccttaagtttctctggcgctgtgttctccacaccttctgtttcaacacagtct
gtctcagtaacatcagggtcacagcagtcagtcagttcaggattgaccttcacagcccca
gcggctctccctcagtcatacaacgcagtcttgtctgttccatcagccaccactgtcact
caacaacaggcctccgctgcagcagggccctcccagtctgcttctccttcttttaatcac
aatctgcaagacctagccttgcttgatgtgagcagtcctaaaaatacacctggtgcgatg
gattttggcagcttgctagccaagtgtgaagatctgcatgatcctttcaccctgttgtcc
agtattggaggcacctacaccacatcccaaccttcactcataggagggataccaggaggg
tccactattccacctgccaagtgtcaggcagatgacagccctctattgcgctctctgtcc
cctatcctcccacatagccagccaagtccaggcagtggagaagaggtatcgctggccaat
gtttttgtacctctggatgccatcaagccaagtaaggtgtgtcctgtgacggcatatgac
aaaaatggtgtccgtcttctgttgcattttgccactgattgtccaccaggcaggcctgat
gttctggtgatggtggcatctatgcttaacacagccccgctgcccgtcaggaacattgtt
ctgcaggctgcggtgcctaagacaatgaaagtgagactgcagtcaccctcgggcacagag
ctggctccttttaacccaatccttcctcctgctgccagcactcaggtcatgctgcttgcc
aatcctctcaaggaaatcgttcggatgagatacaaacttacattcacgctgggagagcag
ccgcacacagaagtgggggaagtgaatgagtttccacctgctgacagatggggggctcta
tag
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