Scomber scombrus (Atlantic mackerel): 133996219
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Entry
133996219 CDS
T10651
Symbol
vps45
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133996219 (vps45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133996219 (vps45)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
133996219 (vps45)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
133996219
NCBI-ProteinID:
XP_062291784
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Position
16:complement(799873..807639)
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AA seq
568 aa
AA seq
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MNVTLAVKQYVSKMIESSGPGMKVLLMDRDTTSIVSVVYTQSEILQKEVYLFERIDSQNR
DNMKHLKAICFLRPTKENVEHLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EIQEFYGDFIAVNPHLFSLNLQGVARGRSWESSMLSRCTQGLTSVLLALKKCPMIRYQLS
SDMSKRLAESVKQIITKEYELFDFRKTEVPPLLLILDRSDDSITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKDLKEVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
DQQKLESITDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERQLMEVSEAEQELACQ
NDHSNAMQSVRRLLQNPRLSELDAVRLVMLYALRYERHSSSILPALMEELSRRGVSERHR
RMVQCVVEYGGKRVRGSDLITPTDAVAITKQFFKGLKGVENVYTQHQPLLHDTLDQLIKG
RLKDSQFPYLGASSLRDRPQDIIVFMIGGAMYEEALTVYNLNRSTPGVRIVLGGSNIHNT
KSFLEEVMSSSSHLTDRAQGGGRHGSRR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgacgctggcggtgaagcagtatgtgtctaagatgatagagagcagcgggccc
ggtatgaaggtgctgctgatggaccgggacacgaccagtatagtcagtgtggtgtacact
cagtcagagatcctacagaaggaagtgtacctgttcgaacgcatcgactctcagaacaga
gacaacatgaaacacctgaaggccatctgcttcctgcggcccaccaaggagaacgtggag
catctgatccaggagctgaggagaccaaagtacagcgtttacttcatctacttcagtaat
gtgatcagtaagagtgagatcaaagctctggctgaggctgatgaacaggaagtcgtggct
gagattcaggagttttatggagacttcatcgctgtgaatcctcacctgttctctctcaac
ctgcagggagtcgctcgggggcggagctgggagtcctccatgctctctcgctgtactcag
ggtttgacctccgtgcttctcgctctgaagaagtgtccgatgatccgttaccagctgtcc
tccgacatgtccaaacgcctcgccgagagcgtcaagcaaatcatcaccaaagagtacgag
ctgttcgacttcaggaagactgaagttcctcctctgctgctcatcctcgaccgcagcgac
gactccatcacacctctgctcaaccagtggacgtaccaggcaatggtccacgagcttctg
ggtctcaacaacaaccggatcgacctgtccagagttccagggatcagtaaagatctaaag
gaagtagttctgtctgccgagaacgacgagttctacgctaacaacttgtacctgaacttc
ggggagatcggcaccaacataaagaacctgatggaggatttccagaagaagaaacctaaa
gatcaacagaagctggagtccatcacagacatgaaggcgttcgtggataactaccctcag
tttaagaagatgtcgggcaccgtgtccaaacacgtgacggtggtgggagaactttcccgc
ctggtgtcggagcgtcagctgatggaagtatcggaggcggagcaagagttagcgtgtcag
aacgaccactccaacgccatgcagagcgtgcgtcgcctgctgcagaaccctcggctctca
gagttggacgcggtgcggctcgtcatgctctacgctctgcggtacgagcgccacagcagc
agcatcctgcccgctctgatggaggagctgagccgccgcggcgtttctgaacgccaccgc
aggatggttcagtgtgtggtggagtacggagggaagcgagtcagaggaagtgacctcatc
acgccgacagacgccgtcgccatcacgaaacagttcttcaagggcctcaagggtgtggag
aacgtgtacactcagcatcagcctctgcttcatgacactctggatcagctgatcaaaggg
agactgaaggacagtcagttcccgtacctgggagccagcagcctccgagacaggcctcag
gatatcatcgtgtttatgatcggtggagccatgtatgaagaagctctgactgtttacaac
ctgaaccgcagcacacctggagtccgtatcgtactgggaggaagtaacatccacaacact
aagagtttcctggaggaagtgatgtcatcgtcgagtcacctcaccgacagagcgcaggga
ggcggtcgccatggcagcaggcgctga
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