Scomber scombrus (Atlantic mackerel): 133996229
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Entry
133996229 CDS
T10651
Symbol
gabpb2a
Name
(RefSeq) GA-binding protein subunit beta-2a
KO
K09454
GA-binding protein transcription factor, beta
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133996229 (gabpb2a)
03029 Mitochondrial biogenesis [BR:
ssco03029
]
133996229 (gabpb2a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
133996229 (gabpb2a)
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
133996229 (gabpb2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Ank_KRIT1
ANK_LRRK2
DUF7756
GrpE
Motif
Other DBs
NCBI-GeneID:
133996229
NCBI-ProteinID:
XP_062291793
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All DBs
Position
16:724168..733708
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AA seq
416 aa
AA seq
DB search
MSLVDLGKRLLEAARKGQDDEVRNLMANGAPFTTDWLGTSPLHLAAQHGHYSTADVLLRA
GVSRDARTKVDRTPLHMAAAEGHAVIVELLVRSGADINAKDMLKMTALHWAAQHGHHSVA
ETLIKHGADVHSLSKFDKTPFDIAVDIQNTELMLLLQEGMQNQVNMNQVNMNVESSSNNQ
PQFIIQGIPSIQGGVVNLAELLNKANAGDSEEAMAANALDSNIQHAAVVNEGGQRVITIV
TDQHGNLQTTGGMSQPFFVTMQHGQQMLAVPANTVTEEVVTEEPQPPPTRKRKLEMNNHS
EAGETELLQRQLLEANRKAQEYRQQLMRKEQEAEEYRMKLEAMSQNQANNAAANAAMTAV
SPEEVVGGEEDEEEGGGVVEEEGEMVVLQEGGIIMEGEEGQVTLVETGGETTEVSS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttggtggacctcgggaagcgtctgctggaggcggctcgtaaaggtcaagacgat
gaagtcagaaacctgatggccaacggagcgccgttcaccaccgactggctgggcacgtct
ccgctgcacctcgccgctcagcacggtcattactcgaccgccgacgtcctgctgcgagcc
ggcgtcagcagagacgctcgcaccaaggtggaccgcacgccgctgcacatggcggctgct
gagggccacgcggtgatcgtagagctgctcgtcaggagcggcgccgacatcaacgccaaa
gacatgctgaagatgacggcgctgcactgggcggcgcagcacggacatcacagcgtcgct
gagacgctcatcaaacacggagccgacgttcactcgctcagcaagttcgataaaacaccg
ttcgacatcgccgtcgacatccagaacacggagctgatgctgctgctgcaggagggaatg
cagaaccaggtgaacatgaaccaggtgaacatgaacgtggagtccagcagcaacaaccag
ccacagttcatcatccagggaatcccttcgatccagggaggcgtcgttaacctggcggag
ctgctgaacaaggccaacgcaggtgactcggaggaagcgatggccgccaacgctctggac
tccaacatccagcacgctgctgtcgtcaacgaggggggtcagagggtcatcaccatagta
acggaccaacacggcaacctgcagaccaccggagggatgtcgcaaccgttcttcgttacc
atgcagcacggacagcagatgctggccgtgccggctaacaccgtgacggaggaagtggtg
accgaggagcctcagccgcctccgaccaggaagagaaagctggagatgaacaatcacagc
gaggcaggagagacggagctgttgcagaggcagctgctggaggccaacaggaaggctcag
gagtatcggcagcagctgatgaggaaggagcaggaagccgaggagtatcgcatgaagctg
gaagcgatgtcacagaaccaggccaacaacgccgccgccaacgccgccatgacggccgtc
agccccgaggaggtggtggggggggaggaggacgaggaggaggggggcggcgtggtggag
gaggaaggagagatggtggtgctgcaggaggggggcatcatcatggagggggaggagggg
caggtaacgctggtggagacgggaggagagacgacggaggtgagctcctaa
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