Scomber scombrus (Atlantic mackerel): 133996320
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Entry
133996320 CDS
T10651
Name
(RefSeq) synaptic vesicle glycoprotein 2A-like isoform X1
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133996320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
133996320
Transporters [BR:
ssco02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
133996320
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GFIT
Motif
Pfam:
LD_SV2
Sugar_tr
MFS_1
MFS_2
Pentapeptide_4
Motif
Other DBs
NCBI-GeneID:
133996320
NCBI-ProteinID:
XP_062291851
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Position
16:12581481..12596208
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AA seq
740 aa
AA seq
DB search
MEDGYQNRTAFIKGAKDIAKEVKRQASKKVGRSVDRVSDEYSKRSYNRFEEDDDDDYPTQ
GSQDGGYYRGDSQAANDDEGGHSDSTEGHDEDDEIYEGEYQGIPRADSGKGSLAGGPGSV
GAGAQQFRDIGVSEAERRKDQEELAQQYETILQECGHGKFQWTLYFVLGLALMADGVEIF
VVGFVLPSAEKDMCLSEPNKSMLGLIVYFGMMVGAFLWGAMADRIGRRQSLLISLSINSV
FSFFSSFVQGYSTFLFCRLLSGVGIGGSIPIVFSYYSEFLSQEKRGEHLSWLCMFWMIGG
IYASAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVAAIAALSAMPESPRFYLEN
GKHDEGWMILKQVHDTNMRAKGYPEKVFSVTTIKTVKQMDELVDTGTDTPVWQRYRLKIM
SLSQQILYLYFAFMCFNFPEYKRTTFMLMAVWFTMSFSYYGLTVWFPDMIKYIQKQEYES
RTKTFTKERVEHVTFNFTLENQVHREGYYFNDKFLNLKMKSMVFEDSVFEECYFEDITSI
HTVFKNCTFIASLFYNTDLFKYRFVNCKLANSTFLHNKEGCMLDFSDDFNNAYMIYFVNF
LGTLAVLPGNIVSALLMDKIGRLRMLAGSSVISCISCFFLMFGNSESGMIALLCLFGGIS
IASWNALDVITVELYPSDKRTTAFGFLNALCKLAAVLGISIFQSFVGITKAVPILFASGA
LAAGSFLATKLPETRGQVLQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggaggacggctatcaaaaccggactgcctttataaaaggtgccaaagacattgccaaa
gaagtcaagcggcaagcctcaaagaaggtcggccgttcagtggatcgggtgagcgatgag
tacagcaagcgctcctacaaccgatttgaagaggatgatgatgatgattaccccacgcag
gggagccaagacggaggctactaccgtggagacagtcaggcagccaatgacgacgagggc
ggccacagtgattccacagagggacacgatgaggatgatgagatctacgagggcgaatac
caaggaatccccagagctgactcaggcaagggcagtctggctggaggtccaggctcagtg
ggggccggtgctcagcagttcagagatattggggtgtccgaggcggagaggaggaaggac
caggaagagctggctcaacagtatgagaccattttacaagagtgtggccacgggaaattc
cagtggaccctgtacttcgtgctggggctggcgctcatggcagatggtgtggagatcttt
gtggtcgggttcgtcctccccagcgctgagaaggatatgtgcctgtctgaacctaacaaa
agcatgctaggtctgattgtatattttgggatgatggtcggggcgttcctctggggagct
atggctgaccggataggacgtcggcagtctctcctcatctctctctccatcaacagtgtc
ttttccttcttctcttccttcgtccagggctacagcacatttttgttttgccggctcctc
tcaggtgtcgggattggcggctctatccccatcgtgttttcctactactctgaattcctg
tcccaagagaagcgtggcgagcacctcagttggctctgcatgttctggatgattggggga
atatatgcatctgcaatggcctgggctataatcccacattatggatggagtttccagatg
ggctcggcgtatcagttccatagctggcgtgtgtttgtgttagtctgtgcgtttccttct
gttgcagccatcgctgccctcagtgccatgccagagagcccacgcttctacttagagaat
ggtaaacatgatgaaggctggatgattctgaagcaagttcacgatactaacatgcgagca
aagggatacccagagaaggtgttttctgtcaccacaatcaagacggtgaaacagatggat
gagctggtggacactggcaccgacactccggtctggcaacgctacaggctgaagattatg
agcctctcccaacagattttatatttgtattttgctttcatgtgtttcaacttcccagaa
tataaacggacgactttcatgctcatggctgtttggtttaccatgtctttcagctattac
ggcctgacggtgtggttccccgacatgatcaagtacatccagaagcaggaatatgaatcc
cgcacaaagaccttcaccaaggaacgagtggagcacgtcacttttaacttcaccctggaa
aaccaagtgcatcgcgaaggatactacttcaatgataaattcctcaacctgaagatgaaa
tccatggtgtttgaagactctgtgtttgaggagtgctacttcgaggacatcacctccata
cacactgtcttcaaaaactgcaccttcattgcaagtttgttttataacacagatttgttc
aaatacaggtttgtcaactgtaaactggcgaacagcacgtttctccacaacaaggagggc
tgcatgctggacttcagcgacgacttcaacaatgcctacatgatatactttgttaacttc
cttggcacgcttgcggtgttgcctggcaacatcgtttcagctctattaatggacaaaatc
gggcgtttgaggatgctggcgggatccagtgtcatctcttgtatcagctgtttcttcctg
atgtttggcaacagtgagtcagggatgatcgccctcttgtgtctgtttggcggcatcagc
atcgcctcctggaacgccctggatgtgataacggtggagctctacccttcggataaaaga
accacagcgtttggcttccttaacgctctctgtaaactagcggccgtcctgggcatcagc
atcttccagtcgtttgttggcatcaccaaggcagtacccatcttatttgcctctggcgcg
cttgctgcaggtagtttccttgcgacgaagttgcctgaaacacgaggccaagtgttgcag
taa
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