Scomber scombrus (Atlantic mackerel): 133996353
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Entry
133996353 CDS
T10651
Symbol
hoxa11a
Name
(RefSeq) homeobox protein Hox-A11a
KO
K21951
homeobox protein Hox-A11
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133996353 (hoxa11a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
133996353 (hoxa11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3528
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
133996353
NCBI-ProteinID:
XP_062291891
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All DBs
Position
16:complement(18811215..18812934)
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AA seq
300 aa
AA seq
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MMDFDERVPVGSNMYLPSCTYYVSAGADFSGLPSFLSQTPSTRPMTYSYSSNLPQVQPVR
EVTFRDYAAIDASGKWPHRGNLPQCYPTSAEDMVHRDCLSAQTAVVGDMFGKNSPAAAAA
AYHHHHHHHHHTSAGSAASNFYGNVGRNGVLPQAFDQFYETAYGNASESSSMNGYSGDKS
ATKQPSSAPEDAPSCRDTEAKEPRVTSSPELSSGNNEEKSSSSNGQRTRKKRCPYSKYQI
RELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLNRDRLQYYTSNPLL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatggattttgacgaaagggtccccgtcggatcgaacatgtatttgcccagttgcact
tattacgtctcggcgggggctgatttctccggtcttccctcttttttatcccagaccccg
tccacccgccccatgacatattcctactcctctaacctgccgcaggtccaacccgtcaga
gaggtgacgttcagggactatgcagccattgacgcgtccggtaaatggccacaccggggg
aacttgccccagtgctaccccacaagcgcggaggacatggtgcaccgggactgtctgtcg
gcgcaaaccgccgtcgtaggggacatgttcggtaaaaacagccccgcagcagccgccgcc
gcgtaccaccaccaccaccaccaccaccaccataccagcgctggctctgctgcctccaat
ttctacgggaacgtgggtagaaatggcgtgttgccacaagctttcgaccagttttacgag
acagcgtatgggaacgcgtcggagagctcctccatgaatggctactcaggggacaaatcg
gcgaccaagcagcctagctctgcgccggaggacgcaccgtcgtgccgggacactgaagca
aaggagccgcgggtgacgagcagcccggagttatcttccggcaacaatgaggagaaatcc
agcagcagcaatggacagagaactcgcaagaaaaggtgcccttattccaaatatcagatc
agagaacttgaacgagaattctttttcagtgtgtacattaacaaggagaaacgcctgcaa
ctgtctcggatgctgaacctcaccgaccgacaagtgaagatttggtttcagaaccgtcgc
atgaaagagaagaaactgaacagagatagattacagtattatacgtctaatcctctgctt
tag
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