Scomber scombrus (Atlantic mackerel): 133996359
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Entry
133996359 CDS
T10651
Symbol
matn1
Name
(RefSeq) cartilage matrix protein isoform X1
KO
K19467
matrilin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
133996359 (matn1)
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
133996359 (matn1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
VWA_3
cEGF
Sec23_trunk
EGF_CA
EGF_3
Plasmod_Pvs28
DUF7326
hEGF
EGF_LRP2
HSBP1
Motif
Other DBs
NCBI-GeneID:
133996359
NCBI-ProteinID:
XP_062291896
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All DBs
Position
16:16469773..16474520
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AA seq
492 aa
AA seq
DB search
MSPNLPLFLLLLGLIGTQATVDLRTAAAMAAGLCKTRPTDIVFIVDSSRSVRPSEFEQVK
VFLAKVIEGLDVGPNATRVGVVNYASRVKNEVSLKTHRTKAGLIKAVTKIEPLSTGTMTG
LAIQFALNVAFSEGEGARVKSPDISKVAIIVTDGRPQDNVKEIAQRARDAGIEIFAIGVG
RVDMSTLKQMASDTLDEHVDYVESYSVIEKLTKKFQEAFCDTVSDLCATGDHDCEQVCIS
SPGSYKCACKDGFTLMDDGRSCSACSNSATDVVFLIDGSKSVRPENFELVKKWINQIIDK
LDVSESKAHVGLVQYSSLVRQEFPLGRFNNKKDLKDAVKKMAYMERGTMTGQALRYLSDS
SFSPSQGARPGVTKVGIVFTDGRSQDYIGDAAKKAKEHGFKMYAVGVGNAVEDELKEIAS
EPTGEHYFYTADFKTMTQIAKKLQINICQEEDPCECDSLVKFQKKVEDALQALTKKLESM
SKRIALLENKIV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctaacctgccgttgttcctgctgctccttggcctcataggaactcaagccacc
gtggacctccgcacagctgctgccatggcagcaggtttgtgcaaaacccggcccacagac
attgtgttcatcgtcgacagcagtcggagtgttcgcccatcagagtttgagcaggtcaaa
gtcttcctggccaaggtcatcgaggggctggatgttggacctaatgccacccgtgtggga
gtcgtcaactacgccagccgtgtgaagaatgaggtgtctctgaaaacacaccgcaccaaa
gctgggctgatcaaggctgtgaccaagattgagcccctgtccactggaacaatgacaggt
ctggccatccagtttgctctaaacgtggccttcagtgagggcgagggtgctcgtgtcaag
tcgcctgatatcagcaaggttgccattatcgtgaccgacgggcgtccccaggacaacgtg
aaggaaatagctcagcgtgctcgagatgccggcattgagattttcgctattggtgtggga
cgtgtggacatgagcaccctgaagcagatggccagtgacaccctagatgaacatgtggac
tacgttgagagctacagcgtaattgagaagctgaccaagaagttccaggaagccttctgt
gacacagtgtcggacctgtgtgccactggggatcatgactgtgagcaggtatgcatcagc
agccccggatcatacaagtgtgcctgcaaagatggctttaccctcatggatgatggtcgc
agctgcagtgcttgcagcaactcagcaacagatgtggtgttcctgatcgatggctctaag
agcgtgcgtcctgagaactttgagttggtcaagaagtggatcaaccagatcatcgacaaa
ctggatgtttctgaaagcaaggctcatgttggactggtgcagtactcgagcttagtcaga
caggagttccccttgggccgcttcaacaataagaaagatctgaaggatgctgtgaagaag
atggcctatatggagaggggaaccatgacaggccaggccctccgctatctgtcagacagc
agcttcagccccagtcagggcgcacggcctggagtcaccaaggtgggcatcgtctttaca
gacggacgcagccaggactacatcggagatgccgccaagaaggccaaggagcatggtttc
aagatgtatgctgttggagtgggcaatgcagtggaggatgagctgaaagagatcgcctct
gagccaactggagagcactacttctacactgctgacttcaagacaatgacccagattgcc
aagaagctgcagattaacatctgtcaagaggaggacccttgtgaatgcgactccctcgta
aagttccaaaagaaagtagaagatgccctacaggcactaacaaaaaaattagagagcatg
tcgaagaggatcgctttgctggagaacaaaatcgtctga
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