Scomber scombrus (Atlantic mackerel): 133996364
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Entry
133996364 CDS
T10651
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1-like
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133996364
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
133996364
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
133996364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ariadne
IBR_1
IBR_2
Ank_2
Ank
Ank_5
UBA_ARI1
Ank_4
zf-RING_2
zf-RING_UBOX
Rcat_RNF216
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
133996364
NCBI-ProteinID:
XP_062291902
LinkDB
All DBs
Position
16:15379800..15395805
Genome browser
AA seq
1329 aa
AA seq
DB search
MGNTATKFRKALVSGDEALAWQLYEGNPQFRDGLDPNASYGEQYQHNTPLHYVCRHAMTR
LLRSFLFSKEGNPNKRNVHNETCLHVLCQGPQILLLPEGALSPRLARPQRDEQRRADCLQ
MILSWTGARLEGGQYEKANVNATDNHHSTCLHYAAAAGMKSCVELLIQSEADLFVEDEGK
LTPCDHAERHHHTELALSLESQMVFSSSSAQQSNTDAHGETNLLQYKEPYEGLKLQDLRR
LKDMLIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSDAEGCCQRSGVTMPTPPPSG
YNAWDTLPSPRTPRTPRSPLTLTLTSPTDSCLTPGEEGLATCGICLCSISVFEDPVDMSC
GHEFCRACWEGFLNVKIQEGDAHNIFCPAYECYQLVPVHVIESVVSREMDQRYLQFDIKA
FVENNPAIRWCPAARCERAVRLTRPGPGDSDPHSFPLLPSPAVDCGKGHLFCWECLGEAH
EPCDCQMWRNWLQKVTEMKPEELAGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCN
HMQCAKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQLEEQSKEMTVEAEKKHKSFQ
ELDRFMHYYTRFKNHEHSYKLEQKLLKTAKEKMEQLSRAFICREGTPPNTRFIEDGVCEL
LKTRRVLKCSYPYGFFLQQGSTQKEIFELMQTDLEMVVEDLAQKVNRPYLRTPCHKIISA
ARLVQQKRQEFLASVARGVAPNDSPELPRRNYPGGSWDWEYLGFASPEMGSRHSVLGPGD
QRERQSQDYADIQYRRRHRPRRRGDMLSLHNLRSSSNTPETSRRSDNTEGPERSEGRRRA
LGSLDEDDPNILLAIQLSLQESRRERGLEGGMERSMEGRVELERGLDRGQERRLGPAGDL
GDVALHSLNKDCPPGARGSSFPTSLLDPPRPPNRTDSTCQPPMPNSLPLPPPPPSLSAEL
LELGDSLMKLGNITTPYDLDTHTQEQLCSHHTYNHSALSASYAMEPAYSDCSHRPDPGAL
NTPYVLDHITITDPRYDSKEQNYCHTSTYLAEAEQTASCALERTQNPAHPSLYNQEHAAT
YDSTPKPDSSYNPCPEHSSSYTQERPAAYALDQPPKSDPQPLAQLCLPSPDPEPELLLSP
VIPPGGPFTPSDPQSLEPLDPTTSAQLLDNIMAWFNHNINPQNNPQSLALIPSPPTTETD
SSPDTHTETESESQTSRNVTPAPIWQPLEGEPEADRGSANPCQGAAGVEGQKRPCTLELE
NREAGEEDVDAGCVADLSLDEAHTHPCSHAQHGNSPTHTAPAADTDLDLVLQLEGDQSPE
EWEEQVHLV
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacacagccaccaagttccgtaaggccctggtgagcggcgacgaggccctggcc
tggcagctgtacgagggcaaccctcagttcagggacggcctggacccgaatgcgtcgtac
ggagagcagtaccagcacaacacaccactgcactacgtctgccgccacgccatgacccgt
ctactcaggtccttcttgttcagtaaagaggggaaccctaacaagcgtaatgtgcacaac
gagacgtgcctccatgtgctgtgccaaggcccacagatcctactgctgccagagggggcg
ctgtcaccacgacttgcccgaccccagagggacgagcagcgccgtgcagactgcctgcag
atgatcctgagctggacgggggccaggctggaaggaggccagtacgagaaggccaatgtc
aacgccactgacaaccaccacagcacctgtctgcactacgctgccgctgcaggcatgaaa
agctgcgtggagctgctaatccagagcgaggcggacctttttgtggaggatgagggcaag
ctgacgccatgtgaccatgccgagcggcatcaccacactgagctggccctcagcctggag
tcacagatggttttctcctcctcttcagctcagcagtcaaacacagacgcacatggtgaa
accaacctgcttcagtacaaggagccttacgagggactgaaacttcaggacctgcgcagg
ctgaaagacatgctgatcgtggagacggcagacatgctgcaagctcccctcttcactgcc
gaggccctgctccgagcacatgactgggatagagaaaaacttctggaggcttggatgtcg
gacgctgaaggctgctgtcagcgctcaggcgtgaccatgcccacccctccacccagtggc
tataacgcttgggacaccctgccctcaccccgcactcccaggacccctcgctcacccctc
acactcaccctcacctcccccaccgacagctgtctcacacctggcgaggagggcctggct
acgtgtggaatctgtctgtgctccatctcagtgtttgaggacccagtggacatgtcctgt
ggccacgagttctgcagagcctgctgggaagggttcctcaatgttaagattcaggagggt
gatgctcacaatatcttctgtcctgcttatgagtgctaccagctggtgccggtgcacgtg
atagagagcgtggtttccagggagatggaccagcgataccttcagtttgacatcaaggcc
tttgttgaaaacaacccagccatccgctggtgtcctgcagcacgctgtgagcgagctgtg
cggcttacccgcccaggccccggggacagtgacccacacagcttccccctgctgccctcc
ccagctgtcgattgtggcaagggtcacctcttctgctgggagtgccttggcgaggcccat
gagccatgtgactgtcagatgtggaggaactggctccaaaaagtcacagagatgaagcct
gaggagctggcaggtgtgagcgaggcctacgaggatgctgctaactgcctgtggctgttg
accaactccaagccgtgtgccaactgcaagtcacccattcagaagaatgagggctgcaac
cacatgcagtgtgccaagtgcaagtatgatttctgttggatctgtctggaggagtggaag
aagcacagctcatcaacaggaggctactaccgttgcactcgctatgaggtcatccaacag
ctagaggagcagtccaaggagatgactgtagaggcagaaaagaagcacaaaagttttcag
gagctggatcgttttatgcactattacactcgcttcaagaaccatgaacacagttataag
ttggagcagaaactgctaaaaacagctaaagagaagatggagcagctgagcagagccttc
atttgccgtgaaggcactcctccaaacacacggttcatcgaggatggcgtgtgcgagctg
ctgaagacgcggcgtgtgctgaagtgctcttacccatacggcttcttcctgcagcaaggc
agcacccagaaagagatatttgagctcatgcagacggacctggagatggtagtggaagat
ctggcccagaaggtcaaccggccgtacctgaggactccgtgccacaagataatcagtgct
gctcgtctagtccagcagaagaggcaggagttcctggcatcagtggctcgtggtgtggct
ccaaacgactctcccgagcttccccgcagaaattaccctggaggatcatgggactgggag
tatctgggctttgcttcccctgagatggggagtcgtcactccgtactgggaccaggagat
caaagggagagacagtcacaggattatgctgacatccagtaccgtcgtagacacaggccg
cggcgcagaggagatatgctgagtctgcacaacctgagaagcagcagcaacacaccagag
accagcaggaggagtgacaacacagagggtccagagaggagcgagggccgcaggagagcg
ctgggttccctggacgaagacgatccgaacatcctgctggccatccagctgtcgcttcag
gagtcccgcagagagcgaggcctggaggggggcatggagagaagcatggagggaagggtg
gagctggagcgcggactggacaggggacaggagaggagactgggtcctgcaggagacctg
ggtgacgttgcgttgcactctctcaacaaagactgtcctccaggagccagaggctcatcc
tttcccacttctctcctagatcctcctcgtcccccaaacaggacagactccacctgccag
cctcccatgcctaactctctccccctccctcccccacctccctctctcagtgcggagctg
ctggagctgggagacagccttatgaaactagggaacataaccactccttatgacctagac
acacacacacaggagcagctctgctcacaccacacatacaaccacagtgctctctctgct
tcctacgccatggaacctgcttacagcgactgcagccatagaccagacccgggtgcactg
aacaccccgtatgtgctcgaccatatcaccatcacagaccctcgctacgacagtaaagag
cagaattactgccacacaagtacttatttggctgaggctgaacagactgcctcctgcgca
cttgaacgtacccaaaaccccgcccatcctagtttatataaccaggaacacgcagccacg
tacgacagcaccccaaaaccagacagctcttataacccttgcccagaacacagtagctct
tacactcaagagcgtcctgccgcctatgctcttgaccagccccctaagtcagacccccag
cccctcgcccagttgtgcctcccttctccagaccctgagccggagctgttgctttcacca
gtcatccccccgggggggcctttcacccccagcgaccctcagagtctggaacccctggac
cccacaaccagtgcccagctgctggacaacatcatggcctggtttaaccacaacataaac
ccccagaacaacccccagagcctggctctcatcccctccccgcccaccacagaaaccgac
tcctcgcccgacacacacaccgagactgagtcagagagccagacctccaggaacgtaacc
cccgccccgatctggcagcccctggagggcgagccagaggcggacagagggtctgcaaat
ccctgtcagggtgctgcgggcgtggagggccagaagaggccttgtactttggagctggaa
aacagagaggctggcgaggaggacgtggatgccgggtgtgtggctgatctgtcgctggac
gaagcgcacacacacccgtgctcacacgcccaacatggaaacagtcccacacacactgcc
ccagccgcagacacagacttagacctcgtgcttcagttagagggggaccaatcacctgag
gagtgggaggagcaagttcacttagtgtga
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