Scomber scombrus (Atlantic mackerel): 133996400
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Entry
133996400 CDS
T10651
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
133996400 (snx13)
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
133996400 (snx13)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
NCH1
DUF6395
Motif
Other DBs
NCBI-GeneID:
133996400
NCBI-ProteinID:
XP_062291950
LinkDB
All DBs
Position
16:17547716..17568701
Genome browser
AA seq
966 aa
AA seq
DB search
MSNVPQQRVSTSQQTQASLSIWGWGGLGVVLFLVTFGPFAIFYLAFYIFCFIGGGFAVTL
LYGKINSEKHLEKCEHSYLPPTQIGILKTLDEMRLEMKPIKIDRRLTGSSFIDEPLQQVI
QFALRDYIQYWYYTLSEDESFLLEIRQTLQNALVQFSTRSKEVDWQPYFTTRLVDDFATH
LRVFRKAQDRLADREDKQRDITDELVDSFFEAEVEMERKICRDVVCTSHKDEEGFLRDLC
ELLLYLLLPPGDFHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFVIWMIRDSSCNYE
AFMNILKLTDKPPELEAVKDKVLEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETRI
QRLHSGKEVDALKLAANFGKLCVIPLDHILVHNIALQFFMDFMQAAGAQAELFFWLTVEG
YRVTAQQQLEAMLGWQKDGKKQPSATKGLLKAAALGVYEQYLSDKASPRVQVDEISVIQL
GEALQKEDPTPEIFDDIQRKVYDMMLRDERFYPSFKQSPLYVRMLAELDMLKEPSYRGSD
DGDGESFNGSPTGSINLSLDDLSNSCHDETMHLHAFISDTGVCNDHGKTYALYAITVFRR
SQDGSEDCWKTYRRYSDFHDFHMRITEQFENLASILKLPGKKTFNNMDRDFLEKRKKDLN
AYLQLLLNPEMVKACPTLIPYVYDFLENKAYSKGKGEFARKIDTFVNPLRSSMRNVSNAV
KALPDSLAEGMTKVSDNMGRMSERLGQDIKQSIFKVPPLLPKSDIDPEHCRVSAQLDDNV
DDNIPLRVMLLLMDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDYMTSP
EQVADYVKKFRDSYWPNGILAETPPRRDKNIRMRTRVAAKTSLLGIMPDELKHIIGADTT
RKGILRVFDMFQYQPMNRRLVYVFLEGFLETMFPQYKFPELFVKLHSRSPRIHRYSQKLK
SSSLKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgtccctcaacaacgagtttctacatcacaacaaacacaggccagtctgtcc
atctggggatgggggggtcttggagtcgtgctgttcctcgtcacctttggaccctttgcc
atattctacctggccttttatatcttctgcttcattggagggggctttgcggtcacgctg
ctctatggaaagatcaactccgagaaacacctggagaagtgcgagcactcttacttgccg
cccactcaaattggtatactgaagacgttggatgagatgcggctggagatgaagccgata
aagattgacaggagactgactggctccagtttcatagatgagccactacaacaggtgatc
caatttgctctgagagactatatccaatactggtactacactctgagcgaagatgagtcc
ttcttattagagatcagacagacgctgcagaatgcccttgtccagttttccacacggtcc
aaagaggtggactggcagccttacttcaccactcgcctggtggacgactttgccacccat
ttacgtgtctttcgaaaagcccaggatcgcctcgctgacagagaggacaagcaaagggac
ataacagacgagctggtggactcgttctttgaggccgaggtggagatggaaaggaagatt
tgtcgagatgtagtgtgcacttcacacaaagatgaagaaggtttccttcgggacttgtgt
gagttgcttctgtatctgttactacctcctggagatttccacaacaaaaacatgagatac
ttcctacgggaagtgctggcgcgtggtgtgctgcttcctctcatcaatcagctgagcgac
ccagactacatcaatcagtttgtcatctggatgattcgggattccagctgtaactatgaa
gccttcatgaacatcctgaagctgacagacaaacctcctgagctggaggccgtaaaggac
aaagtgctggaggagctgcagtacctccgctcgctggacacagcaggagatgacatcaat
gtaatcaagaaccagattaacagtcttctgtttgtgaagaaggtgtgtgaaacaaggatc
cagagactacattcgggcaaggaggtggatgccttgaagctggcagccaatttcggcaag
ctgtgtgttattccgctggatcatatccttgtccacaacatcgccctgcagttcttcatg
gatttcatgcaggcagcgggggcccaggcagagctgttcttctggctcactgtggagggc
tacagggtgacggcacagcagcagctggaggcgatgctgggctggcagaaagatggcaag
aagcagcccagtgccaccaaggggctgctgaaagccgctgcactgggtgtctatgaacaa
tacctctctgacaaggcgtctcccagagtgcaagtagatgaaatatcagtaatacaactg
ggggaggcgctacagaaagaagaccccacacctgagatatttgacgacatccagagaaag
gtgtatgacatgatgctgcgtgatgagcgcttctacccctccttcaagcagagtcctctg
tacgtacgcatgcttgcagagctggacatgctgaaagagccgagctaccggggatctgat
gatggcgacggggaatctttcaatggctctccaacaggaagcataaacctatctttggac
gacttgtccaactcctgccatgatgaaactatgcacctacatgccttcatctccgacaca
ggggtttgcaacgaccacggtaagacctacgcactctacgccatcactgtgttcagacgc
agccaagacggcagcgaggactgctggaaaacctaccgccgctactctgacttccatgac
ttccatatgaggatcactgaacagtttgagaacctggcgtcgatcctcaagctgccaggg
aaaaagactttcaacaacatggacagagacttcttggagaagagaaaaaaggacctcaat
gcttatttacagttgctgctgaacccagagatggtgaaggcctgcccaactctgattcct
tatgtctatgacttcttggagaacaaggcctacagcaagggcaaaggagagtttgcacgc
aagatagacacatttgtgaatcctctccggagctccatgaggaacgtgtccaatgcagtg
aaggccctgccagacagtctggctgagggcatgaccaaagtctctgacaacatgggtcgc
atgtcagaaagactgggccaggacatcaaacagtcaatattcaaggtgcctccactcctc
cccaagtcagacatcgaccctgaacactgtcgagtctccgctcagttagacgataacgtc
gatgataacattccactgcgggtaatgctgctgctgatggacgaggtgtttgatctcaag
gagaaaaaccagtggctacgcaggaacattaagaacctgctgcagcagctcatcagggca
acatatggagacaccatcaacagaaaaattgtggaccatgtggactacatgacctcacca
gagcaggtggcagattatgtcaagaagtttagggattcctactggcccaatggtattctg
gctgagacgccaccccgtcgggacaagaacatccgcatgaggacacgagtcgccgctaag
accagcctgctgggtatcatgccagatgagctgaagcacatcattggggcggacaccacg
cggaagggcatactgcgcgtctttgacatgtttcagtaccaacccatgaaccgtcgtctt
gtctacgttttcctggagggcttcttggagaccatgttccctcagtacaaattcccagag
ctctttgtcaagctgcactcccgctctccgcgtatacacagatacagccagaaactcaaa
tcctcctccctcaaaaggtga
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