Scomber scombrus (Atlantic mackerel): 133996427
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Entry
133996427 CDS
T10651
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133996427 (rnf115b)
04121 Ubiquitin system [BR:
ssco04121
]
133996427 (rnf115b)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133996427 (rnf115b)
Membrane trafficking [BR:
ssco04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133996427 (rnf115b)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133996427 (rnf115b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-RING_5
Zn_ribbon_19
zf-rbx1
zf-ANAPC11
zf-C3HC4_3
U-box_ZFPL1
Motif
Other DBs
NCBI-GeneID:
133996427
NCBI-ProteinID:
XP_062291987
LinkDB
All DBs
Position
16:11494389..11500929
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AA seq
295 aa
AA seq
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MAEAADRPQHRFFCHCCKCETNPKLPDLICPRCESGFIEEVTEDSSLLENSTSVASDDSN
SLFSELWQLLFMERSALLSHPPSSESDPGDSEQVSAGQSRLSPVLAGAAEVTEPEAPSQP
EQERSTRPEQRPAVEGIVQQFLAGLFANNGNPGAAPAALSNMLQLHSNPGDYAWGQGGLD
AVITELLGQLENTGPPPAEKEMISSLPTVCISQEQTACRLECPVCREEYLSGESVRKLPC
LHYFHSECIVPWLELHDTCPVCRKSLEGVDNSLQPTSDPLEARSIRTEQQERQAI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggacagaccacaacaccggtttttctgtcactgctgtaaatgtgaa
acaaaccccaaactcccggatttaatctgccccaggtgtgaatctggcttcattgaggag
gtgacagaagactccagcctcctggagaacagcacatcagtggccagtgatgattcaaat
tcattgttctcagaattatggcagctgctgtttatggagcgctctgccctgctgtcgcat
ccgccctcctcagagtccgacccaggtgacagtgagcaggtatctgctggtcagagccgt
ctttcaccggtgttggcaggagctgctgaggtcacagaaccggaggctccttctcaacct
gaacaggagaggtcaacccggcctgagcaaaggcctgcagtggaagggattgtgcagcag
tttttggccggcctgtttgccaacaacggaaaccccggtgctgcaccagctgcactatcc
aacatgctacagttgcactcaaaccctggggattatgcgtggggtcagggaggtctggac
gctgtcatcacagagttattaggacagttggagaacacaggtccacctcctgctgaaaag
gagatgatctcctccctgcctacagtttgtatctctcaagaacagacagcctgcagactg
gagtgtccagtttgcagggaggagtatttgtcaggggaatctgtcaggaagcttccctgc
ctccattacttccacagtgaatgtatagtgccttggctggagctgcatgacacctgccca
gtgtgccgcaaaagcctcgaaggtgtcgacaacagcctccagcccacatcagatccccta
gaagctcgctccatcaggacagagcaacaggagaggcaggcgatctga
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