Scomber scombrus (Atlantic mackerel): 133996442
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Entry
133996442 CDS
T10651
Symbol
trappc9
Name
(RefSeq) trafficking protein particle complex subunit 9 isoform X1
KO
K20306
trafficking protein particle complex subunit 9
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133996442 (trappc9)
Membrane trafficking [BR:
ssco04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
133996442 (trappc9)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC9-Trs120
Vps23_core
Porphyrn_cat_1
Motif
Other DBs
NCBI-GeneID:
133996442
NCBI-ProteinID:
XP_062292005
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Position
16:complement(23746107..23957221)
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AA seq
1149 aa
AA seq
DB search
MSVPDYLQCAEDHQTVLVVVQPVGIVPEDLFFKIYKRIASVNQLSIRDSQRLLYIRYRHH
YLPENNEWGDFQTHRKVVGLISITTCATAKEWPQTAERFHGQKEVYSSTLYDSRLLVFGL
QGDIAEQQRTDVAFYSSFEDCSDVEKRVEDFVESIFIVLESKRLDRATDKSGDKIPLLCV
PFEKKDFVGLDTDSRHYKKRCQGRMRKHVGDLCLQAGMLQDALVHYHMSVELLRGVNDFL
WLGAALEGLCSASVIFHYPGGTAGKTAGRKPSISQPADAGKRHRPGAQEVLIDPGALTAN
GISADTSTEIGRAKNCLSQEDIIEKYKEAISYYGKYKNAGVIELEACVKAVRVLAIQKRA
REASEFLQNAVYINLGQLSEEEKIQRYSILSELYELIGFHRKSAFFKRVAAMQCVAPTIP
EPGWRACYKLLLETLPGYSLSLDPKDFNKGTHRGWAAVQMRLLHELVYASRRMGNPALSV
RHLSFLLQTMLDFLSDQEKKEVTQSLENYTSKCPGGMEVITLPDGLKLLPVPFTKLPIVR
SVKLLNLPVSLRPHKVKGLLAENMSTASPFIYSPIILHNRGEERCKKIDFQWVQGDVCEV
QLMVYNPMPYELRVENMGLLTSGVEFESLPAALSLPAESGLYPVTLVGVPRTAGNITVNG
YQTSVFGVTSDCLLEGLPGVKTSGCLVEVIPALPRLQLSTSLPRSAHTTQPMSKEELSSS
VSVQLFNGETQQLTITLDNIGSEDIESLELTSKIVSTKEKVFGEFLSWELEEALSHLPLK
PGQAVTLTVSIKVKLDFSGQESLLQDLNDDGISVTGLPISSPLRQVLKPRSETKQVSSEA
GKSEYSHIKTLEAVLNFKYSGGAGKVEGYYRELSLGVHVDVEPSVFFTRVSTLPATSTRQ
CHLLLDIFNPTEHELTVSAKNNQDLVLHASECQRMAIQVDKFDFESLPQPDQETVRFANP
KQLEEERQHAQGCQINSKLGICWSIPSLQRRGEASVEGVLNQLVLEHLQLAPLQWDVLVN
GEPCDCDVIADCKVGDAVTLEVKLTNRSKNAVGPLALTVVPYQDFQNGVQNYDLEDAVTF
IGSNTFYIDTVKPKESSVCVGALLLLYNGDFYLNIKFQDDSAGRELPLAWFTLPSVHIRS
QDTPLQAGA
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcccagactacctgcaatgcgccgaggaccaccagaccgtgctcgtggtggtc
cagccggtcggcatcgtccccgaggacctgttcttcaagatctacaagcgcatcgccagc
gtgaaccagttgagcatcagggactcccagcgtctcctctacatccgctaccgccaccac
tacctgcccgagaacaacgagtggggcgacttccagacgcaccgcaaggtggtgggcctc
atctccatcaccacctgcgccacggccaaagagtggccccagactgccgagcgcttccac
ggccagaaggaggtttacagctccacgctctacgattcccgcctgctggtgttcgggctc
cagggtgatatcgcggagcagcagaggacagacgtggccttctactccagctttgaagac
tgctcagacgtggagaagagagtggaagattttgtggagtcgatatttatcgttctggag
tcgaagaggcttgaccgagccactgataagtctggtgataagatccctctgctgtgcgtg
cccttcgagaagaaggactttgtgggtttggacactgacagcaggcattataaaaagcgt
tgccagggacggatgaggaagcatgttggggacttgtgtctccaggcgggcatgctgcag
gacgccctggtccactatcacatgtctgtggagctgctcaggggggttaacgacttcctc
tggctgggtgctgcattggagggtttgtgttcagcatctgtcatattccactaccccgga
ggcacagcggggaagactgcgggacgcaagccaagcatctcccagccagcagacgcaggg
aaacgccacagaccaggggcacaggaggttctcattgacccaggagccctcacagccaac
ggcattagcgccgacaccagcaccgagatcggacgagcgaagaactgcctgagtcaggag
gacattatcgagaaatacaaagaggccatctcctactacggcaagtataagaatgcaggc
gtgatcgagctggaggcctgtgtgaaggcggtcagggtgctggccattcagaagagagcc
agggaggcctccgagttcctgcagaacgccgtttacatcaacctgggacagctgtcagag
gaggagaagatccagcgctacagtatcctgtccgagctgtacgagctgatcggcttccat
cgcaagtcagcgttttttaagagggtcgccgccatgcagtgcgtcgcccccaccatcccg
gagcctggctggagggcctgctacaagctgctgctggagaccttacctggatacagtctt
tccctcgatcccaaagacttcaacaaaggtacccaccgaggctgggccgccgttcagatg
cgtctgctgcacgaactggtgtacgcctcccgtcgcatgggtaaccccgccttgtctgta
cgccacctgtccttcctgctgcagaccatgctggacttcctgtccgatcaagagaagaaa
gaggtgacccagagtcttgaaaactacacctctaagtgtccgggtggaatggaggtcatc
acccttcctgatggcctgaagctccttccagtgccctttacaaagctccctattgtccgg
tcagtgaagctcctcaatctgcctgtcagtctgcgtccccacaaagtgaaaggcctgctg
gcagagaacatgtccactgccagccccttcatctactcgccaatcatcttacacaacaga
ggagaggaacgttgcaagaagattgacttccagtgggttcaaggagatgtctgtgaggtg
cagctcatggtctacaaccccatgccttatgaacttcgagtggagaacatgggtttgctg
acctctggagttgagtttgaatccctgcctgctgcactgtccctgcctgcagagtctggg
ctctaccccgtcactctggttggcgtcccacgaacagctggcaacatcactgtcaatggt
taccaaacgtcagtgtttggtgtgaccagtgattgcctgttagagggcctgcctggtgtg
aagacgagtggctgtttggtggaggtcattcccgcgctgcctcgtctccagctcagcacg
tctttaccacggtcagctcacacaactcagcccatgtccaaagaggaactgtccagcagc
gtgtccgtccagcttttcaatggagagacccagcagctgaccatcaccttagacaacatc
ggatccgaggacatcgagagtctggagctcacctcgaagatcgtcagcaccaaagagaaa
gtgttcggagagtttctgagctgggagttggaggaggcgctgtctcacctgccactaaag
cctggccaggctgtgacgctgaccgtcagcatcaaagtcaagctggacttctctggtcag
gagagcctgctgcaggacctcaatgatgatgggatcagcgtgacgggcttgccaatctcc
agtccgctgcgccaagtcctcaaacccaggtccgagaccaagcaagtcagcagcgaggcc
gggaaatcagagtacagccacattaagactttggaagcggtgctgaacttcaagtactct
ggaggagcaggcaaagtggagggctactacagggagctgtctcttggagtccatgttgat
gtggagccatccgtgttcttcaccagagtcagcacccttcctgctaccagcacccgccag
tgtcatctactgctcgacatcttcaacccaacagagcatgagcttacagtctctgccaaa
aacaaccaggacctggttctccatgctagtgagtgccagaggatggccatccaggttgac
aagtttgactttgagagtctgccacagccggaccaggagacagttcgcttcgctaaccca
aaacagctggaggaggagcgacagcatgctcagggctgccagatcaacagcaagctgggc
atctgttggagcatcccttcgctgcagcgccgtggagaagccagcgtggaaggagtcctc
aaccaactggtcctggaacacctacagctcgctcctttgcagtgggatgtgttggtgaat
ggggagccatgtgactgcgatgtcattgccgactgtaaagtgggcgacgccgtgacgctg
gaggtgaaactgaccaatcggagcaagaacgcagtgggtcccctggccctgactgttgtg
ccctaccaggacttccagaacggggtccagaactacgacctggaggacgccgtcaccttc
atcggctccaacaccttctacatcgacacggttaaacccaaggaaagctccgtctgtgtg
ggtgccctgctcctcctatacaatggagatttctaccttaatatcaagttccaggatgac
agcgctggccgagagcttcccttagcctggttcactctgcccagcgtccacatcaggtca
caggacactcctctacaggctggggcctga
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