Scomber scombrus (Atlantic mackerel): 133996497
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Entry
133996497 CDS
T10651
Name
(RefSeq) cingulin-like isoform X1
KO
K23284
C1q-related factor
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133996497
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Phagocytosis
Opsonins
133996497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
ATG16
Shugoshin_N
Tropomyosin
UPF0242
FPP
BclA_C
GAS
DUF7653
Uso1_p115_C
CCDC39
MAD
Rod_CreS
Cnn_1N
APG6_N
FKBP15
Rab11-FIP3
Hmw_CFAP97
INO80F
Laminin_I
Motif
Other DBs
NCBI-GeneID:
133996497
NCBI-ProteinID:
XP_062292070
LinkDB
All DBs
Position
2:complement(3189205..3222734)
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AA seq
435 aa
AA seq
DB search
MRRAAAFLALLLCLYWTRAQGESGGATGNDITQTEIQSEILGVKSTSDQTNISPDIWAEL
KELRDMAIEHSVELRNSKSKMEKLEQENTAIQARLTASEYKNAVLEARMNASENEVVKLK
IESADMMARLKISEHVMEELKRENTDLLHRVTSVEDKNKVLEARMNASENEVEELKRQNA
DMMARLKINEHGMEELKRENTVLEARMNASENEVVKLKIESADMMARLKISEHVMEELKR
ENTDLLHRVTSVEDKNKVLEARMNTSENEVEELKIESADMMARLKISENEVEELKRQNAD
QPKVAFSIGLTDSGLIGPFNTDITLKFSKVITNIGQAYSPSTGLFTAPVRGAYYFSFTTL
DRRSSAYRNIYIYHNDKRMLLSYNYSANANESVSNSLVLQLEKGDVVYLVLPAGYSVYDD
SGDITTFNGFLLFPL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgtgctgcagcttttctggcgttgctgctctgtctgtactggacgagggctcag
ggtgagagtggaggggctacagggaatgatatcactcagacggagattcagtctgagatc
ctgggtgtcaaatcaaccagtgatcagaccaacatcagccctgacatctgggctgagctg
aaggagctgagagacatggccatcgaacacagtgtggagctgaggaacagcaagagcaag
atggagaagctggagcaggagaatacagccatacaggccagactgacagccagtgaatac
aagaatgcagtgttggaggccagaatgaacgccagtgaaaacgaggtggtgaagctcaag
atagagagtgcagatatgatggccagattgaaaatcagtgaacatgtgatggaggagctc
aagagagagaacacagatcttctacacagagtaacatcagttgaagataagaacaaagtg
ttggaggccagaatgaacgccagtgaaaacgaggtggaggagctcaagagacagaatgca
gatatgatggccagattgaaaatcaatgaacatgggatggaggagctcaagagagagaac
acagtgttggaggccagaatgaacgccagtgaaaatgaagtggtgaagctcaagatagag
agtgcagatatgatggcaagattgaaaatcagtgaacatgtgatggaggagctcaagaga
gagaacacagatcttctacacagagtaacatcagttgaagataagaacaaagtattggag
gccagaatgaacaccagtgaaaacgaggtggaggagctcaagatagagagtgcagatatg
atggccagattgaaaatcagtgaaaacgaggtggaggagctcaagagacagaatgcagac
caaccaaaggtggcgttctcaattggtctcactgacagcggactaattggacccttcaat
actgacatcacacttaagttcagtaaagtcatcaccaacattggtcaggcctacagtcca
tctacaggtctcttcacagccccagtcagaggagcctactacttctcattcactacactg
gatagacggagtagcgcatacaggaatatttatatctatcacaatgacaagagaatgttg
ttgagttataattacagtgcaaatgccaacgaaagtgtttctaattcactggttcttcag
ctggaaaagggggatgtggtctatctggttttacctgccggctatagtgtatatgatgat
tctggtgatattactacctttaacggatttctgttatttccactgtga
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