Scomber scombrus (Atlantic mackerel): 133996544
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Entry
133996544 CDS
T10651
Symbol
rnf5
Name
(RefSeq) E3 ubiquitin-protein ligase RNF5
KO
K10666
E3 ubiquitin-protein ligase RNF5/185 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133996544 (rnf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133996544 (rnf5)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133996544 (rnf5)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133996544 (rnf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
RING_XB3-XBAT31
zf-rbx1
Prok-RING_4
zf-C3HC4_4
Baculo_IE-1
Rtf2
zf-UDP
IBR_1
zf-RING_6
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
133996544
NCBI-ProteinID:
XP_062292116
LinkDB
All DBs
Position
16:complement(7969668..7985117)
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AA seq
210 aa
AA seq
DB search
MAATDPRSSSDGGPASRAGFPAGESSNDRDGPSGGGGGTGEGERDRATFECNICLDTARD
AVISMCGHLFCWPCLHQWLETRPSRQQCPVCKAGISREKVIPLYGRGSSSQEDPRLKTPP
RPQGQRTEPESRGGMFQGFGDTGFHMSFGIGAFPFGFFTTVFNTNDPFHRADQYAGDQQG
NGNLNNGNNNWQDSLFLFVAIFFFFWLLSV
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacagatccccggtcctcgagtgacggtgggccggccagcagagcaggattc
ccggcgggggagagcagcaacgaccgggacgggccaagcggcggcggcggagggaccgga
gaaggagaacgggaccgggccacctttgaatgcaacatctgtttggacactgccagggac
gctgtcatcagcatgtgtggccatttattctgctggccctgtcttcatcaatggttggag
acgcggcccagcaggcagcagtgtcctgtgtgtaaagcgggcatcagcagagagaaagtc
atcccgctgtacggcagagggagctccagccaagaggaccccaggttgaaaactccacct
cggcctcagggacagagaacagagccagagagtcgaggcgggatgttccagggtttcggc
gacaccggctttcacatgtctttcggcatcggggctttccccttcggcttcttcactaca
gtcttcaacaccaacgacccttttcacagagcagaccagtatgcgggtgatcaacaaggc
aacggtaacctcaacaacggcaacaacaactggcaagactccctcttcctgttcgtggcc
atcttcttcttcttctggctgctgagcgtgtga
DBGET
integrated database retrieval system
