Scomber scombrus (Atlantic mackerel): 133996548
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Entry
133996548 CDS
T10651
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133996548 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133996548 (clasp2)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
133996548 (clasp2)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
133996548 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
RTP1_C1
Cnd1
HEAT_DAAF5
MMS19_C
ParcG
TAN
DUF2726
Motif
Other DBs
NCBI-GeneID:
133996548
NCBI-ProteinID:
XP_062292120
LinkDB
All DBs
Position
16:16202731..16259370
Genome browser
AA seq
1503 aa
AA seq
DB search
MEEHDNMDYFYQQVVQKDVTRRLQVGQDLIDYLNDPQRSPDVEQDKPRLDKTIDELTGWV
NASNFKVALLGIDICGAFVDRMGERFKGYLGTVLPPLVDRLGDGKDQVRENSQAVILRCM
EQTASPMYVWEKLLTSFKHKNFRSREGLCLCLSATLNTYGAQPLSLSKIVPHLCSLTGDQ
NPQVREASTATLVDVYRHVGERVRVDLGKRGLPAARLQTIFTRFDEALNSGNMALSLSHD
RSFEDDDSVDGNRSSAQAAFKVPKVPKKPAESSAARRPSATGSKLVSKDSAGGVDEEDFI
NSFTDVPTVQIYSSRDLEDNLNKIREICSDDKHDWDQRAIALKKIRSLLVAGAPTYDCFY
QHLRLLDGAFKLSAKDLRSQVVREACITVAHLSTVLGNKFDHGAEAIVPVLFNLIPNCAK
VMATSGVSAIRIIIRHTHVPRLIPLITSNCTSKSVSVRRRCYDFLDLLLQEWQTHSLERH
TTVLVESIKKGIRDADSEARVEARKAYWGLRNHFPVEADALYNSLESSYQRTLQSCLKSS
GSVASLPQSDRSSSSSQESLNRPLPSKWSAAPGRVPAGSKGGVSSASLQRSRSDVDVNAA
AVAKHRHVGQARGAGRLPPGSYCSLGRVRTKQPLSTASNVSSQVDSRGRSRTKMVSQSQP
GSRSGSPGRVLTSTALSTLSTGAHRVLAGASGDGHRRSRIPRSQGCSRDSSPTRLSVAPS
SISSIYNGASRGARGSRIPRPSMSQGCSREASRESSRDTSPVRSFTPLATRSYSRSTGAL
HTPDAFGAAGSGFGISQSSRLSSSVSAMRVLNTGSDVEEALADALLLGDMRSKKPARRRY
ENYSMYSDDDANSDASSACSERSYSSRNGGAIPTYMRQTEDVAEVLNRCASANWSERKEG
LLGLQALLKNQRTLSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFVLVHKEDLQDWL
FVLLTQLLKKMGADLLGSVQAKVQRALDITRDSFPNDLQFTILMRFTVDQTQTPNLKVKV
AILKYIETLTLQMDAPDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQSVLIALFQLNTP
EFTMLLAALPKTFQDGATKLLQNHLKNTGNVAQAPMGSPLTRHTPRSPASWSSPVTSPTN
TSQNTPSPRYHTYGAFDYDTENMNSEDIYSSLKGVTEAIQNFSVRSQEDMNDPVQRREGE
ESGSGTDVMDGGRMALDNKTSLLNTPLLSSSPRGAREHFSDSPFKHSRKDTSLDDSEHLT
DADSSLDQSELVAELLKELSNHNERIEERKAALCELLKLIRENTLQVWDEHFKTILLLLL
ETMGDREHVIRTLALRVLREILSKQPWRFKNYAELTIMKALESHKDPHKEVVRAAEETAA
MLALSISPDQCIKVLCPIIQSADYPINLAAIKMQTKVIERVPREGLMSMLPEIVPGLIQG
YDNSESSVRKACVFCLVAIYAVIGEDLKPHLGQLTSSKLKLLNLYIKRAQSGSSGSEPPT
DGL
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacatgacaacatggactatttttaccagcaggtagtgcagaaagacgttacc
cgcaggctgcaggtcggccaggacctcattgactacctgaacgacccgcagcgctctccg
gacgtggagcaggacaaaccccggctggataagaccatagatgagctaacgggatgggtg
aacgccagcaatttcaaggtggcgttgttgggaatcgacatctgcggtgcatttgtggac
cgcatgggggagcggttcaaaggatacctgggaacagtgttgccacccctggtggacagg
ctgggtgatgggaaggaccaggtcagggaaaacagccaagctgtcatcctgcgctgcatg
gagcagactgcctcgcccatgtacgtttgggaaaagctacttactagttttaaacacaag
aacttccgcagtagagaaggactctgcctctgtctcagtgccacgctcaacacgtatgga
gctcagccattgagtctcagtaaaatagttcctcatctctgctctctgactggagaccaa
aacccacaggtacgtgaggcctccacagcaacacttgtggatgtttatcgccacgttgga
gagagagtcagggtggacctgggaaagagaggactgcctgctgcacggttacagacgata
ttcactcgttttgatgaagccttgaattcaggcaacatggctctcagcctgagtcacgat
cgtagttttgaggatgatgacagcgtggatgggaatcgttcttcagcccaggctgccttc
aaggtccccaaagttcccaagaagcctgcagagtcttccgctgcacgcaggcccagcgct
accggtagcaagctagtgtccaaggacagtgccggaggagttgatgaagaggatttcatt
aattctttcacagatgtccctactgtccagatctactcatcaagagatctcgaggacaac
ctgaataagatccgtgagatctgctctgatgacaaacacgactgggaccagagagccatc
gctctgaagaaaatccgctcattgttggtggcgggcgctcccacctatgactgtttctac
cagcatctacggctactggatggagccttcaaactgtctgctaaagacctgcgctcccaa
gtggtccgggaggcctgcatcactgtggcccacctttcaacggtgctcgggaacaaattt
gaccatggagcggaagccattgtccccgtcctgttcaacctcatccccaactgtgccaaa
gtcatggccacctccggtgtgtcggctatccgcatcatcatacggcacacccacgtcccg
aggctcatcccccttataaccagtaactgcacttccaaatctgtgtctgttagaaggcgc
tgttatgattttttggaccttctgctacaagaatggcaaacccattctctagagaggcac
acaacagttctggttgagagcatcaagaagggaattcgagatgccgactcagaggccaga
gtagaggcccgcaaggcctactggggtctgaggaaccactttccagtggaggcagatgct
ttgtacaactcattggagtcgtcgtaccagaggacccttcagtcctgcctgaagagctct
ggcagcgtggcctcacttccccagagtgaccgctcctcgtcctcttctcaggagagcctc
aatcggcctctgccttctaaatggtcagcagctccagggcgagtccctgcgggttcaaaa
ggtggggtgtcatcggcctccctgcagcgttcccgtagtgacgtggatgtaaatgcagca
gcagtcgctaagcaccggcatgtcggacaggccaggggagcgggccgactgccccctggc
tcctactgctcactgggccgtgtacgcaccaagcagcccttgtccactgccagcaacgtg
tccagccaggtggactcccgaggacgcagccgcaccaagatggtctcccagtcacaaccc
ggcagtcggagtggctcccctggccgcgtgctgacgagtacagcgctgagcaccctgagc
acaggggcccacagggtgctggcaggggccagcggggacggacacagacgaagccgcatc
cctcgtagtcagggctgctccagagactcctcccccacccggctgtctgttgctccctcc
agcattagttccatctacaatggtgcaagcagaggagctcggggcagtcgtatccctcgg
cccagtatgagtcagggctgcagcagagaggccagcagggagagcagccgggacaccagc
cccgtacgctccttcacacccctcgcaacgcggagctactctcgctccaccggagctctc
cacacacctgatgcttttggggctgcaggatcaggttttggcattagtcagtccagtcgt
ctctcttcttctgtcagtgccatgagggtcctcaacaccggctccgacgtagaagaggct
ctcgcagatgcactgctgttgggagacatgcggtccaagaagccagcaaggcggcggtat
gaaaactacagcatgtactctgacgacgatgccaacagtgacgcgtccagcgcctgctca
gaaagatcctacagctcaaggaacggaggagcgatcccgacctacatgagacagacagaa
gacgtagctgaggtgctgaaccgctgtgccagcgctaactggtcagagaggaaggagggc
ctgttgggcctacaggcgctgttgaagaaccaacgcaccctcagtcgggtagagttgaag
aggctgtgtgaaatcttcaccaggatgtttgcggaccctcacagtaaggtgttcagcatg
ttcctggagacactcgtagatttcgtcctggtccataaggaagacctgcaggactggttg
ttcgttttgctcacgcagctgctgaagaagatgggagccgacctgctgggctccgtacag
gccaaagttcagagagcattggatatcacacgagactctttccccaatgacctccagttt
actattctcatgaggttcactgtggaccagactcagacccccaacctcaaggtgaaggtg
gccattctgaagtatatcgagacgctgacgttgcagatggatgctcctgactttgtaaac
tccagtgagactcggctggccgtctcccgcatcatcacctggacgactgaacccaagagc
tctgacgtcagaaaggcagcacaatccgtgctaattgccctcttccagcttaatacacca
gagttcaccatgctgctggcagctctgcccaaaacctttcaggacggagccaccaagctg
cttcaaaaccatctgaagaacactggcaacgtcgcacaggcaccaatgggcagccctctg
acgcgccacaccccccgctctccagccagctggtccagcccagtcacctccccaaccaac
acctcccagaacaccccctcaccaaggtatcacacatatggtgcttttgactacgacaca
gagaacatgaactcggaggacatctacagctcactgaaaggtgtcactgaggcgattcag
aacttcagcgtccgcagccaggaggacatgaatgatccggttcaacgacgggagggagag
gagagtggcagcgggacagacgtaatggacggcgggcgcatggctctggacaacaagact
tccctcctcaacacccccctgctctcctccagccccagaggagcccgcgagcacttctcc
gactcgcccttcaagcatagccgcaaagacaccagcctggacgactctgagcatctcact
gatgcagatagcagcctggaccaatcagagctagtggccgagctgctgaaagagttgtcc
aatcacaacgagcgcattgaggagaggaaggcggcgctgtgtgagctgctaaagctaatt
cgagaaaacactctgcaggtgtgggacgaacatttcaagaccatcctgctgctcttgctc
gagacgatgggcgacagagagcatgtgatccgaacactggctttgcgggtgttgagagag
attctcagcaagcagccctggaggttcaagaactacgcagagctcaccatcatgaaggcc
ctggagtcacacaaagacccccacaaggaggtggtacgagcagcagaggagacagcagcc
atgttggcgttgtccatcagtccagaccagtgtatcaaagtattgtgtcccatcatccag
tcagctgactaccccatcaacttagctgccatcaagatgcagaccaaggtgattgagagg
gttcctcgcgagggcctgatgagcatgctgcctgagatagtgccaggactcatacagggt
tatgacaactctgagagcagtgtgaggaaagcgtgtgtgttctgcttggtggccatctac
gcagtgataggagaggacctcaaaccgcacctcggccaactcaccagcagcaagctgaag
ctgttgaatctgtacatcaagcgtgcccagtccggctccagcggcagtgaacccccaact
gacggcctatag
DBGET
integrated database retrieval system
