Scomber scombrus (Atlantic mackerel): 133996658
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Entry
133996658 CDS
T10651
Symbol
sgce
Name
(RefSeq) epsilon-sarcoglycan isoform X1
KO
K27061
epsilon-sarcoglycan
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133996658 (sgce)
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Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
Motif
Other DBs
NCBI-GeneID:
133996658
NCBI-ProteinID:
XP_062292248
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Position
16:complement(18011565..18023974)
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AA seq
418 aa
AA seq
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MINKMSAAAVAVWLGTVVTILSRSHADRNVYPSAGVLFVHVLEREYFKGEFPPYPKSGDA
SNDPITFNTNLMGYPDRPGWLRYIQRTPHSDGVLYGSPTAEHVGKPNIIEITAYNRRTFE
TARHNLVINIMATEEFPLPFQAEFYIRNMNVEEMLASEVLGDFLGAVKNVWQPERLNAIN
ITSALDRGGRVPLPINNLKEGVYVMVGADVPFSSCLREVESPHNQLRCSQEMEPVISCDK
KFRAQFHIDWCKISLVDINKVVPVYITRPDPGTGVLPEFGVYKPPSESLKRRDYFSDFLV
TLAVPSAVAVVLLFILGYTLCCRREGVQKRNMQTPDIQLVHHSAIQKSTKELRSMSKNRE
ISWPLSTLPVFNPVSGEVVPPIHPDNYETTSMPLMQTQTNLQNQITIPQQRPSGKWYS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacaagatgtccgctgctgccgtcgcggtatggctgggcacggtggtcaccatc
ttgtcgaggtcgcacgcagaccgtaatgtctacccatctgcaggagtgctgttcgtccat
gtactagaaagagagtacttcaaaggagagtttccaccttaccccaagtcaggtgacgcc
agcaatgacccgattactttcaacaccaacctgatgggctaccccgacaggccaggttgg
ctgcgctacatccagaggactcctcatagcgacggagtgctctatggctcccccactgca
gagcatgttggcaagcccaacatcatagagattactgcctataacagacgcactttcgag
acagcacggcacaacttggtcataaacatcatggccacagaagagttccccctccccttc
caggcagagttttacatcagaaacatgaatgtggaagagatgctggccagcgaggtcctg
ggggacttcctgggagcggtgaagaacgtatggcagcctgagcgcctcaacgctatcaac
atcacctcagcactggaccgtggcggccgtgtgcccctgcccatcaacaacctgaaggaa
ggagtgtatgtgatggttggtgctgatgttcccttctcgtcgtgcctgcgggaggtggaa
agcccacataaccagctgcgctgcagtcaggagatggagcctgtcatcagctgtgacaag
aagttcagagctcagtttcacatcgactggtgtaagatttctctggttgacataaacaaa
gtagtcccggtatacattacccgtcctgacccgggaacaggagtcctgcctgagtttggg
gtctacaaacccccgtctgagtctctgaagaggcgggactacttttccgacttcctcgtc
acgctggctgttccctctgcggtggcggtagtcctcctcttcatcctcggctacactttg
tgctgtcgacgtgaaggggtgcaaaaaagaaacatgcaaacaccagacatccagctggtt
caccacagtgccatccagaagtccaccaaggagctgaggagcatgtctaagaaccgggaa
atctcttggcccctctccactcttcctgtcttcaacccagtcagcggcgaggtggtgccg
cccatccaccccgacaactacgagaccaccagcatgcccctcatgcagacacagacgaac
ctgcaaaaccagattacaataccacagcaacggccatcaggtaaatggtattcctga
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