Scomber scombrus (Atlantic mackerel): 133996672
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Entry
133996672 CDS
T10651
Symbol
edn1
Name
(RefSeq) endothelin-1
KO
K16366
endothelin-1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04080
Neuroactive ligand-receptor interaction
ssco04270
Vascular smooth muscle contraction
ssco04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133996672 (edn1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
133996672 (edn1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
133996672 (edn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ssco04052
]
133996672 (edn1)
Cytokines and neuropeptides [BR:
ssco04052
]
Neuropeptides
GPCR binding
133996672 (edn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endothelin
Motif
Other DBs
NCBI-GeneID:
133996672
NCBI-ProteinID:
XP_062292269
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All DBs
Position
16:9818413..9820660
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AA seq
199 aa
AA seq
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MDMYIFISVLSVMYSWSLCTVLSAPATETPTASTVTQRRHVRTKRCSCATFLDKECVYFC
HLDIIWVNTPERVVSYGLGNAPRTRRAVSDSMATSTGPRCRCLRENDSTCRNFCLLENPL
RYETSPDTVIHSAEGDGCAGAQCKHKLAADTGRIKRSSNKKRVLPQMLRAALKTRLLLKK
WSVRQRRRARAWDGESSAS
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtacattttcatctccgtgttatcagtgatgtactcctggagtttgtgcaca
gtcctatcagcaccagccacagagacacccaccgcctccaccgtcacccagaggcgccat
gtgcggaccaagcgctgctcctgcgccactttcctggacaaggagtgcgtctacttctgc
cacctggacatcatatgggtcaacacacctgagcgtgtcgtctcttacggattgggcaac
gctcccaggacgaggcgcgccgtctcggactccatggcaaccagcaccggacctcgctgc
cggtgcctccgtgaaaacgacagcacatgcagaaacttctgcttactggaaaaccccctc
aggtatgagacatcaccagacacggtgatccactccgccgagggcgatggctgtgctggg
gctcagtgcaaacacaagctggcagcagacacgggcaggattaagaggagtagcaacaag
aaacgggtgttgcctcaaatgctcagggctgcgttgaaaacccgcttgctgctcaagaag
tggagtgtgagacagcgccgcagggcaagagcatgggacggcgagagctcagcctcctaa
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