Scomber scombrus (Atlantic mackerel): 133996713
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Entry
133996713 CDS
T10651
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
133996713
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133996713
NCBI-ProteinID:
XP_062292320
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Position
16:369598..378960
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AA seq
926 aa
AA seq
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MGTIQRHLLLLLSLLLHLNPSLSYSLKNCTVDYSEGGSADIVLNCLHGDLAAVPHDIPRD
VSSVDLSNNLIGQINRKDFGFFSKLRLLFLDSNKIAHVDGGSFIGLAALSTLGMRANELT
SLTGNLFQGLSNLTTLDIGQNKIQFIDASAFQFLTSLQTVMLDLNQIQQVSDIQPILQLP
HLQNLSIGQNQFHSFQTKDLLLNISSSLKVLNVAYSELEIFSITTPIFPHLQLIDISHGS
LKWDIPDKTLLKNITQLYFNFISLPFKDMQKVLQSLDSLMHLTLNYMEKSIKKGLLDIVC
KIPTLKKLDLSCNSFPKISAKLVNCSQLTELDLSSTLMTEVFPGSIQSMKRLRYLNLQDN
MLSKVPDDIRGLSSLEILDLSSNYVIELGCGDFLNTTRLTELNLSNNRIAKLDSCAFENL
EDLKVLDLSNNLLLTFGGAFKTGLQKLEFLHLSKNFVSVLEKGDFEALGSVKYLDVVLDN
IKRVTKKAFDGMNNLETLNVKLPLQFEIDFSGLHQLKSLTEHFNTDDRGDHCGFPLDVPT
YIYRAMKNLEEFTAVNVFVSAPDPTTFVPNLKIKNVTIQQTDLTEFDPFLFRLIPNLRSL
DLSRNKLRSLDFLAQANLSVLSWLKLSENKLTVINETVFRSLPALTYLDLLGNPFTCDCS
NSGFIQWVISNNQTQVVNAYQYTCSFPLAKQGSKLLDFDIQSCWMDVNFLCFISSTCLVV
LTLLTSFIYHFLRWQLTYGFYLFLAFLYDSKKRKKEAPHCYDAFISYNVRDEAWVYQEML
PVLEGEQGWRLCLHHRDFQPGKPIIENITDAIYSCRKTICVISRHYLQSEWCSREIQMAS
FRLFDEQKDVLILLFLEDIPAHQLSPYYRMRKLVKRRTYLSWTQAGGHKGVFWQNVRRAL
ETRDAPNETTDLLTGPPGRFPRMQTS
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaatacaaagacatcttctcttacttctgtctctgctgcttcatctcaaccct
tcactctcatattcactgaaaaactgcactgttgattattctgagggtggctctgctgat
attgtcttgaattgtcttcatggtgatcttgctgctgtccctcatgacatccccagagat
gtgagctcagtagatctcagtaacaatctcattggacagattaacaggaaagattttggc
ttcttttcaaagctgagacttttgttcctggactcgaataagattgctcacgtagacggt
ggatctttcatcgggttggcggcgttgtcaacacttggcatgagagctaatgaactcacc
agcctgacaggaaaccttttccagggactgtccaacctcacaactcttgacattgggcaa
aacaaaatccagttcatcgatgcctcagcctttcagttcctgaccagcttacagactgtg
atgctggatttgaaccagatccaacaagtttccgacattcagcccatcttacagctacca
catctacaaaatctgagcattggacaaaatcaatttcattctttccagaccaaagatctg
ctgctgaacatatcctcaagcctcaaggtgttgaatgtagcttacagtgagttggaaata
ttcagcatcaccacaccgatctttcctcaccttcagctgattgacatttctcatggcagt
ttgaaatgggacatccctgacaagactttactgaagaacataactcaactgtattttaac
tttatttcactgccttttaaagacatgcaaaaagtcctgcagagtcttgactcgctgatg
catctcactctaaattacatggaaaagtcgatcaaaaaaggcctcttagatatagtctgc
aaaatcccaacgcttaagaagctggatctgtcttgcaactctttccctaaaatcagtgca
aagcttgtgaattgctctcagctcactgaacttgacttgagcagcactttgatgactgaa
gtgtttccaggctccatacaatccatgaagcgactgaggtacctcaacttacaagacaac
atgctctcaaaagtgccagatgacatcaggggtctctcctcccttgagatcctggatctg
agcagtaattatgtcattgagttgggctgtggtgatttcctaaacacaacacgcctcact
gaacttaatctgagcaacaaccgcattgctaaactggactcgtgtgcctttgaaaatctg
gaagatctgaaagttttagatttaagtaacaacctgctgttgacattcggaggcgccttc
aaaactggcctgcagaagcttgaattcctccatttgagcaaaaactttgtgtctgttttg
gaaaaaggggattttgaagctttaggatctgtaaagtatttggatgtggtgttagataat
atcaaaagggtgacaaagaaagcttttgatggaatgaacaacctggaaactcttaatgtg
aagcttccactccaatttgaaatagacttcagtggactgcatcagctgaaaagtctcact
gaacattttaatactgacgacagaggcgatcactgtggctttcccttagatgtaccaaca
tacatctacagggcaatgaaaaatttagaggagttcacggctgtgaatgtgtttgtttcc
gcaccggatccaacaacatttgtgcccaaccttaagatcaagaatgtgacgatccagcag
actgatttgacagaatttgatccttttctgtttcggctgatcccaaacctccggtccctc
gatctgtccagaaacaaactcagatctttggattttctggctcaggccaatctttcggtt
ctcagctggttgaaactcagtgagaacaagttgacggtgatcaatgagacggtcttccgg
tctctgcctgcactaacatatctggacctgcttggtaaccctttcacctgtgactgctct
aatagcggcttcatccaatgggtgattagcaacaaccagacacaagttgttaacgcctat
cagtacacttgttcctttcctttggctaaacaaggaagcaagctgctggactttgacatc
cagtcctgctggatggacgttaatttcctctgcttcatttccagcacttgtctggttgtg
ctaactctcctcacatccttcatctaccactttctgaggtggcagctaacctacggcttc
tacctcttcctggccttcctctatgacagcaagaagaggaagaaggaagctcctcactgc
tacgacgcattcatctcctacaacgttcgtgacgaggcctgggtttaccaagagatgctt
ccagtgctggaaggagagcagggctggagactctgtctgcaccacagagacttccaacca
ggtaagcccatcatagagaacatcacagatgccatctacagctgcaggaagaccatctgt
gtgatcagccgtcactacctgcagagcgagtggtgctccagagagatccagatggccagc
ttccgtctgtttgatgagcagaaggacgtgttgatcctgctgtttctggaggacatccct
gctcatcagctgtctccgtactaccgcatgaggaagctggtgaagagacgcacctacctg
agctggacgcaggctggtggacacaaaggagtcttctggcagaacgtacggagagctctg
gagacgagggacgctcccaacgagaccaccgacctgctgaccggacctccaggacgcttt
ccaaggatgcagacgtcttga
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