Scomber scombrus (Atlantic mackerel): 133996720
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Entry
133996720 CDS
T10651
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
133996720
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GFIT
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NCBI-GeneID:
133996720
NCBI-ProteinID:
XP_062292326
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Position
16:537965..552677
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AA seq
1379 aa
AA seq
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MRRRSFFLFLFLLLPFNPSLSYSLKNCTVEYSADVSDVSVSCTDRELTTVPDDIPKTAQF
LDICTNQILRINQTDLRGLSKLVVFWMQLNSLSHIDDGAFADLVELTELDISYNALTNLT
DNMFQGLTKLLSLSVNRNDIAYISPLAFQPLINLQKVDLGDNELHIITDIVPILQLSSLI
ELDIAINRFTTFESDDLHLNISNLRTLQFNLNPLRKFSITKDVFPHLEYVDLSKCSVGFE
WNVTDKMFLRSLTSLLLSGTEISFETYSTMLQSAESVEYLWLSYTAEWFDKGLIDIACQI
PALTSLDLTFNDIHILNDTLLQPCSKITELALVGNVMTHLSEDSLKPLTQLVELHLHHNF
LPGVPFAVRGLSSLAVLTLGYNDIGELSCSDFLNLTSLMQLFLNNNRISRIRGCVFQELK
NLRLLHIQENPIYSLDDTFKVSLKSLRILNMHRNDLKELHEGNFENLSFLLNLDLESRSI
YQVENGTFEGLDHLQTLVLTPYSLNTVMFRGLPHLERLTLTLPNFLNSVSHQLPKEPPFL
NVPSLRKLIIQNNNKYDWVIPPDLLRGLNSLEHFAAVNFFAGPPHPDTFTYTPHLISLQI
TNSNVSYPEPELVRSIPNLQSLDLSKNKLRSLDFLAHADLPALSWLKLSENELTVINETV
FRSLPALTYLDLLGNPFTCDCSNVGFIQWVISNNQTQVVNAYQYTCSFPPSKQGSKLLDF
DIQSCWMDVNFLCFISSTCLVVLTLLTSFIYHFLRWQLTYGFYLFLAFLYDSKKRKKEAP
HCYDAFISYNVRDEAWVYQEMLPVLEGEQGWRLCLHHRDFQPGKQYIYSSFPPSYSGSNL
SFSSGKPIIENITDAIYSCRKTICVISRHYLRSEWCSREIQMASFRLFDEQKDVLILLFL
EDIPAHQLSPYYRMRKLVKRRTYLSWTQAGGHKGVFWQNVRRALETRDAPNETTDLLTAA
LAPDQMYGRLNFIMGYADHEAYSSILKMTESSWIKISPSPDDVQSILMSQENRINGSCSG
STTKVTIQGDTLSTDVYNVTSSFHVHRTGSDCFSFSINSTARNLGKLLRLMKLDGPFPDE
ITSRAFYVFSRETTVKDSDLENFKKQASCFGFTKEPDFHFDPKKGKPIIENITDAIYSCR
KTICVISRHYLRSEWCSREIQMASFLVTMNLWFSAHFLLAALHLSSSAPTHEECSTLVSP
LSLSDPSVMYGRLNFIMGYADHEAYSSILKMTESSWIKISPSADDVQSILMSQENRINGS
CSGSTTKVNIQGNSTDVYNVTSSFHVHRTGSDCFSFSINSTARNIGTLRRLMKLDGPFPD
KITSRAFYMFSRETTVKDSDLEHFKKQASCFGFTGEPDFHFDPKKEFCAEGEGIRGVLP
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgccgctcctttttcctcttcctcttcttgctgcttccttttaacccttcgctg
tcttactctctgaaaaactgcaccgtcgaatattctgcagacgtcagcgatgtttcagtt
tcgtgcacggaccgagaactcaccaccgttcccgacgacatccccaaaaccgcccagttc
ctcgatatctgcaccaatcagatcctgagaatcaaccagacagatctgagaggtttatcg
aagctcgttgttttctggatgcagttaaactctttgtcacacattgacgacggcgcgttt
gcagacttggtggaattaacagaacttgatataagttataatgccctcacaaacctcaca
gacaacatgtttcagggactgaccaaattactgagtctgtctgtaaacagaaatgacatc
gcgtacatctccccgctggcctttcagccgctgataaacttacagaaagtagacctgggt
gacaacgagctccatataatcactgatattgtgcctattttgcagctgtcaagcttaatt
gaattagacattgcgataaacagattcactacctttgagtctgatgacctgcatttaaac
atctcaaacctgaggacactgcagtttaatttgaatccactgagaaagttcagcatcaca
aaagacgtctttcctcatctagagtatgtcgatttgtccaaatgcagcgtcggctttgag
tggaacgtaaccgacaagatgtttctgaggagtttgactagtttgttattaagtggaacc
gaaataagttttgagacgtacagcacgatgcttcagagcgctgagtcggtggagtatctc
tggctcagctatacggctgaatggtttgataaaggtttgatagacatcgcctgccagatt
cctgccttaacaagtcttgatttgacttttaatgacattcacattttaaatgacacactg
cttcaaccttgctccaaaatcactgagctagctttagtcggtaacgtcatgacccacctt
tcggaggactcacttaaacctttgactcagctcgtggaactacatttacaccataacttt
ctaccaggagtgccgtttgctgtcagaggtctctcatcccttgcagtcttaactctgggt
tataatgatatcggcgagctcagctgctccgatttcctgaacttaacgagcttgatgcaa
ctcttcctcaataacaatcgcatctcaagaatcagaggatgtgtttttcaagagttgaag
aatttaagattactccacattcaagaaaatccaatttacagtttggatgatactttcaaa
gtcagtctgaagagcttacgtattttaaacatgcacaggaatgatttgaaggaactccat
gaaggcaactttgagaatctgtctttcctcctgaatttggatttagagtcacggtcaatt
tatcaagtggaaaacgggacttttgaaggactcgatcatctccaaactcttgtccttaca
ccatactctctcaatacagttatgttcagaggactgccacacttagagagactgacacta
accctcccaaattttctcaacagtgtgagtcatcaattacctaaggagccccctttctta
aatgtaccatctttgagaaagcttataatccaaaacaacaataaatatgactgggttatc
ccaccagacctgctcagaggcctgaactctttagagcactttgcagcagtaaatttcttt
gcagggcccccacatccagacacatttacctacactcctcacctgataagtcttcagata
actaacagtaacgtctcatatccagaacctgaactggttcggtcgatcccaaacctgcag
tccctcgatctgtccaagaacaaactcagatctttggattttctggctcacgccgacctg
ccggctctcagctggttgaaactcagtgagaacgagttgacggtgatcaatgagacggtc
ttccggtctctgcctgcactaacatatctggacctgcttggtaaccctttcacctgtgac
tgctctaatgtcggcttcatccaatgggtgattagcaacaaccagacacaagttgttaat
gcttatcagtacacttgttcctttcctcccagtaaacaaggaagcaagctgctggacttt
gacatccagtcctgctggatggacgttaatttcctctgcttcatttccagcacttgtctg
gttgtgctaactctcctcacatccttcatctaccactttctgaggtggcagctaacctac
ggcttctacctcttcctggccttcctctatgacagcaagaagaggaagaaggaagctcct
cactgctacgacgcattcatctcctacaacgttcgtgacgaggcctgggtttaccaagag
atgcttccagtgctggaaggagagcagggctggagactctgtctgcaccacagagacttc
caaccaggtaaacaatacatttactcttctttccctccctcctactcaggatcaaatctt
tctttcagttcaggtaagcccatcatagagaacatcacagacgccatctacagctgcagg
aagaccatctgtgtgatcagccgtcactacctgcggagcgagtggtgctccagagagatc
caaatggccagcttccgtctgtttgatgagcagaaggacgtgttgatcctgctgtttctg
gaggacatccctgctcatcagctgtctccgtactaccgcatgaggaagctggtgaagaga
cgcacctacctgagctggacgcaggctggtggacacaaaggagtcttctggcagaacgta
cggagagctctggagacgagggacgctcccaatgagaccaccgacctgctgactgctgcg
ctggctccagaccagatgtacggcaggctgaacttcatcatgggctacgctgatcatgaa
gcatacagctccatcctgaaaatgactgaaagctcctggatcaaaatcagtccgtcacca
gatgatgtgcaaagtattttaatgtctcaggagaacagaataaatggaagctgttctggc
tcaacaaccaaagtaaccatccaaggcgacactctctctacagacgtgtataacgtgacc
tcgagcttccacgtgcatcggaccggttctgactgcttcagcttcagcatcaacagcacg
gccagaaacctcggcaagctgctccgcctgatgaagctggacggcccgttcccagatgag
atcaccagccgggccttctatgtgttctcgagagaaacaaccgtgaaggattcggatctg
gaaaatttcaagaagcaggcgagctgcttcggcttcaccaaagaaccagacttccacttt
gacccgaagaaaggtaagcccatcatagagaacatcacagacgccatctacagctgcagg
aagaccatctgtgtgatcagccgtcactacctgcggagcgagtggtgctccagagagatc
cagatggccagctttttggtcaccatgaatctgtggtttagcgctcacttcctgttagcg
gcgctgcacctgagcagctcggctccgacgcatgaagagtgcagcactttggtctctcct
ctgtctctgagcgaccccagtgtgatgtacggcaggctgaacttcatcatgggctacgct
gatcatgaagcatacagctccatcctgaaaatgactgaaagctcctggatcaaaatcagt
ccgtcagcagatgatgtgcaaagtattttaatgtctcaggagaacagaataaatgggagt
tgttccggctcaacaaccaaagtaaacatccaaggcaactctacagacgtgtataacgtg
acctcgagcttccacgtgcatcggaccggttctgactgcttcagcttcagcatcaacagc
acggccagaaacatcggcacgctgcgccgcctgatgaagctggacggcccgttcccagat
aagatcaccagccgggccttctatatgttctcgagagaaacaaccgtgaaggattcggat
ctggaacatttcaagaagcaggcgagctgcttcggcttcaccggagaaccagacttccac
tttgaccccaagaaagagttctgcgctgaaggcgaaggcatccgaggggttttaccatga
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