Scomber scombrus (Atlantic mackerel): 133996730
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Entry
133996730 CDS
T10651
Symbol
itgb8
Name
(RefSeq) integrin beta-8
KO
K06591
integrin beta 8
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04510
Focal adhesion
ssco04512
ECM-receptor interaction
ssco04514
Cell adhesion molecules
ssco04810
Regulation of actin cytoskeleton
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133996730 (itgb8)
04514 Cell adhesion molecules
133996730 (itgb8)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133996730 (itgb8)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133996730 (itgb8)
04810 Regulation of actin cytoskeleton
133996730 (itgb8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133996730 (itgb8)
04515 Cell adhesion molecules [BR:
ssco04515
]
133996730 (itgb8)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133996730 (itgb8)
Cell adhesion molecules [BR:
ssco04515
]
Integrins
Integrin beta subunits
133996730 (itgb8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
PSI_integrin
EGF_2
Integrin_B_tail
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
133996730
NCBI-ProteinID:
XP_062292336
LinkDB
All DBs
Position
16:complement(17457580..17471975)
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AA seq
794 aa
AA seq
DB search
MTSWLRTYGSVPLCLLLGFLGVYAEPGDSACWSPSMASCAECLRRGPQCAWCFKEDFLDG
AGPSHRCDLPVNLLRRGCGPEFMEQSEIKVVNTTTSSTQVSPQDISITLRPGSEASFRVD
VKQLERYPVDLYYLVDVSASMQENLDHLKTVGVALSLRMTEHSSDLWLGFGSFVDKPVSP
YINVHPSKINNPCSDFEIRCRPAHGFHHGLSMTGNMSEFTRVIKRQKISGNMDTPEGGLD
AMLQAAVCQRELGWRPESKRLLLLMTDQPSHLALDSRLAGIVTPNDGLCHLENNVYTAST
RMDHPSVGQLSDKLLDSHIYSIFAVEKQQYQWYEELVRLLPGSYLGKIGYFQAPNLIELV
VDAYKRLLSEVAVSVSVEDKAASRYWVSVSPVCPDGSTARDQSCLGVQPNQTVSFNITIG
LRSCPDDGEDEDITVTVRPVGYNESTIIRVHAKCHCSCGPTGRCRDGNQSPCSGTEDGTN
WEQRPDRGFLKDSSRDSNWNCRADGSDVDCSGRGVCECGKCVCEQSRLGTVYGKHCELDD
FSCPYEGGLLCGGRGMCVLGECVCEDSWTGDSCSCPISTATCQSPNGLLCGGQGRCVCGK
CVCDDSRYSGNFCERCPACQTTCQSSWKCVKCHLSHGLTQQEAGHCNDTCASLVGYMDDV
SGQVGEMWIQCMYISNDNCRYRFQTSSETGLNQLHISTRPECTSNSRLVGTFLSVCALTV
LCGLVVVAVSRLVLQKKGWSPGDATEDGDYHCTVKDLSYIPTTNEKTVTYRRDHPPERPV
EMHIQVSKMQSWHC
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgacttcctggctccgcacatacggcagcgtccctctgtgtctcctgctcggcttctta
ggggtctacgcagaaccgggtgacagtgcgtgttggtctcctagtatggcttcttgtgct
gagtgtctcagacgtggaccacagtgtgcctggtgcttcaaagaggactttctggatggg
gcgggcccgagccaccgctgtgacctgccggtgaacctgctcagaagaggctgtggacca
gagttcatggagcagtcggagattaaagtggtcaacaccaccaccagcagcacacaagtg
tccccacaggacatcagcatcaccctcagacccggttcagaggccagcttcagagtggat
gtgaagcagctggagcgttatcctgtggatctatattacctggtggatgtatcggcatct
atgcaggaaaaccttgatcatctgaagacggtgggcgttgctctgtctcttcgtatgacg
gagcactcctcagacctttggctgggttttggctcatttgtggacaaacctgtctcccct
tacatcaatgtccatccctctaagatcaacaacccctgcagtgattttgaaatccgctgt
cgtccagcccacggcttccatcacggcttaagtatgacagggaatatgagtgagttcaca
cgtgtcatcaaacgccagaagatctccggtaacatggacacacctgagggaggactggac
gctatgctgcaagctgctgtctgccagagagagttgggttggaggccagaatccaaacgt
ctgctgctcctgatgaccgaccagccttcccacctcgccctggacagccgcctggcagga
atcgtcaccccaaatgacggcctgtgtcacctggagaacaacgtctacacggcaagcacc
aggatggaccatcccagtgtgggccagttgtccgataagctgctggacagccatatctac
tctatctttgcagtggagaagcaacagtaccagtggtatgaggagttagtgcgtttgctg
cctggctcctacctgggcaagataggctacttccaggccccaaacctcatagagctggtg
gtagacgcatacaagaggttgttgtcggaggtggcggtgtcagtgtcagttgaggacaag
gcagccagcaggtactgggtgtctgtgtctcccgtctgtcctgacgggtccactgctagg
gaccagagctgcttgggggtgcagcccaaccagacggtttccttcaatatcaccatcggc
ctgcgatcttgtccggatgatggtgaagatgaagacataacagtgacggttcgccctgtg
ggttacaacgaatccaccattattagggttcacgctaaatgtcactgcagttgtggacca
acaggacgctgccgtgatggcaaccagtcgccatgcagcgggactgaagatggcactaac
tgggagcagaggccagatcggggatttcttaaagactcaagcagagattcaaactggaat
tgcagagccgatgggtctgatgtggactgtagtggtcggggagtgtgtgaatgtgggaag
tgtgtgtgtgagcagagcagactcgggacagtgtatgggaaacactgcgagttagatgac
ttttcctgcccttacgaaggtggactgctgtgcggaggacggggtatgtgtgtgttaggt
gagtgcgtgtgtgaggacagctggacaggtgatagctgcagttgtcccatctccacagca
acctgccagtcgcctaacggcctgctgtgcggtgggcagggcaggtgtgtgtgtggcaaa
tgtgtgtgtgatgacagccgatactctggaaacttctgcgagagatgccctgcttgccaa
accacctgccagtcatcgtggaagtgtgtaaagtgccacctgtctcatggtctcacgcaa
caagaggcgggccactgcaatgacacttgtgcttcattggtgggctacatggatgatgta
tcaggtcaagtgggggagatgtggattcagtgtatgtacatcagtaatgacaactgtcgc
taccggtttcaaacgagctcagagactggactgaaccagcttcacattagcacaagacca
gagtgcaccagcaacagccggctggtaggaaccttcctgagcgtgtgcgcgctgacagta
ttgtgtgggctggtggtggtggctgtgtccagactagtgctgcagaagaaaggctggtca
ccaggggacgccactgaggatggagactatcactgcactgtcaaggacctgtcatacatt
cctacaaccaatgagaagacagttacctacaggagggaccatccacctgagcggcccgtg
gagatgcacatccaagtttccaagatgcagtcctggcactgctag
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