Scomber scombrus (Atlantic mackerel): 133996798
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Entry
133996798 CDS
T10651
Name
(RefSeq) LOW QUALITY PROTEIN: F-actin-uncapping protein LRRC16A-like
KO
K20493
leucine-rich repeat-containing protein 16
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Membrane trafficking [BR:
ssco04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
133996798
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133996798
NCBI-ProteinID:
XP_062292366
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Position
16:complement(2339251..2387637)
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AA seq
1373 aa
AA seq
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MSEEKTDIPTELLESVREAVGRRVKLTLRRKVQLEVKGDKVENRVLALASHRAFLLTARI
PSKVESSFSYLDIQGISSNKPNQLVLEGERGPWSLRLTSVEEVDEVIAHIGGCLHRICPA
GSPVKVMRKLSLKPPDRTTALQTIWDEQGSADLGPCGGFSHQYWCVCDSLGLPYREEVQW
DVDTIYLTQDTRELNLQDFIHLENRDLVPIIAALEYNQWFTKLSAKDYKLDNGASALSAQ
LAKLPMGLKHLNLSRTSMSPKGVNSLCQALCANPSISTSLTHLDLSGNSLRGDDLPNLHS
FLSQSNCLETLDLSNSDCSLEQVCVSLLRGSLKHLSVLNMSKTVYSHRKSKEIPSSFKQF
FSSSQALSSVSVSGTRLPVEALKALLLGLGCNPNLSDVSLDLSSCELRSGGSQILEGCIA
EIPNISSLDISDNSLDMDLITLLVWLAKNRSIRHLSLGKNFNNIKSKNVAPVLDNLVHMI
QEEDSPLTSLSLADSRLKADISIVLNALGSNTSLTKLDISGNAMGDMGAKMLAKALQINT
KLSSIVWDRNNISPQGLQDVAAALEKNYTIRFMPVPIMDAAQALKANPEKTEDALLKMEQ
YLLRNHETRKYLQEQAYRLQQGIVTTTTQQMVDMMCVKVQDHLNSLKFTEANLVQEDMKV
AENLMKDARNSKTLLPNLYHLRSWGLKGPCVGAIQDKLESMAGEVSMVMDEQLQTMLASM
VDAAEGLCPHVMKRSSLRQELLKAGTGRMTVPRSFITTTLLEQSGADIINKISEVKLSIA
SFLSDRIVDEILESLSRSQHTLADHLNRKVQPLLHHEPQLEAEVLDESILQPESKTAGGY
GHLHGEDGGRDGGREGEREGWMDTCMMTPKSKRKSILVRMLRPVSVAFEMEFDLDKALEE
VPIHVEDPPPSSSQPSDMTSHCHGDSFPDSKPLCLGELPPVEHMTLEHRTKLRPKPKKRT
KPSRSQRESTVASATHESEQNVMEKLDEGLEEFFSKKVIKLSFKRPTVKGSSSSPQEGAE
KKRESRKSGFFNLIKSRNFPAQRKSHGAASVSPPHPASSPSVTTVTEESTAQASPTSPRP
LQDRAQSLDTTDSETEVSPTAAEEEKEEEAEEKNENVEKEEATAEKKENPHIPRHIGVPL
MGMDLMAEMKARQERKAAKKSESSLLHDKANMLMSPNQNRLPGSNHPFHFRPRWPNPCRP
PRCSGPMSPTSPTSQTNPTSPTSPTSPTNPTSPTSPRPTSTYVHDDSAETPAAVCSSPKA
ALPAPCLKRAPSEQERESTSSNPGPSSPLDADCPADGDAFESPAAVGESSAGSRQYSSLK
GSTSLPHREEDREKAKSLPAYVRPPSSPVTDTDVIPAAETRSEDESGDDSASV
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggagaagacggacattcccacagaactcctcgagagtgtgcgggaagcggtc
ggtcgaagggtgaaactgaccctgaggcgcaaagtccagctggaagtcaaaggtgacaag
gtggagaacagagtgctggctttagcatcacaccgagccttcctgctgactgcacgcatc
ccctccaaggtggaaagctccttcagctatctggatattcaaggaatcagcagcaacaaa
cccaatcagttggtgttggagggtgagcgcggcccatggagcctgcggctgacctcggtg
gaggaagtggacgaggtgatcgctcacatcggaggctgtctgcaccggatctgccccgcc
ggctcacctgtgaaggtgatgaggaagctgagtctgaagcctccggacaggacgacggct
ctgcagaccatctgggacgaacagggctcggctgatcttggaccctgcggcggcttctct
caccagtattggtgtgtgtgtgacagcctgggtctgccctacagagaggaggtccaatgg
gacgtagacaccatctatctcactcaggacaccagagagctcaacctgcaggacttcatc
cacctggagaacagggatctggtgccaatcatcgcagctctggagtacaaccagtggttc
actaaactctctgctaaagactataaactggacaatggtgcgtctgctctgagcgctcaa
cttgccaaactcccgatgggcctgaagcacctgaacctctccagaacctccatgtctcct
aaaggagtgaacagtctctgtcaggctctctgtgcaaacccgtccatctccacttctctc
actcacctcgatctgtcaggaaactcgctcagaggagacgacctaccgaatctgcacagt
ttcctgagtcagtccaactgtttggagactttggatctgtccaacagcgactgctctctg
gagcaggtgtgtgtttctctgctcagaggatctttgaagcatctttctgtcctcaacatg
tcaaaaactgtttactctcacaggaaaagtaaagaaatcccttcgtccttcaagcagttc
ttcagcagctctcaggctctgagctcagtcagcgtgtcaggaaccagacttcctgtcgag
gctctgaaagctttgctgttgggactcggctgcaacccgaacctcagcgatgtgtctctg
gatctcagctcctgtgagctgcgttcaggaggctctcagatcttggagggttgcatcgct
gagatcccaaacatctccagtctggacatctctgacaacagtttggacatggatctgatc
acgctgctggtctggctggctaagaatcgctccatcagacatctgtcactgggaaaaaac
ttcaacaacatcaagtccaaaaatgttgctccggttctggacaacctggttcatatgatc
caagaggaggattcaccgctgacctcgctctcgctggctgactccaggctgaaggccgac
atctccatcgtgctcaacgctctgggcagcaacacgtctctgactaaactggacatcagt
gggaacgctatgggagacatgggggcaaagatgctcgctaaggctctgcagatcaacacc
aagctgagttcaatagtgtgggacaggaacaacatcagtcctcagggtctgcaggacgtt
gcagctgctctggagaagaactacaccattcggttcatgcctgttcccatcatggatgct
gctcaggctctgaaggccaatcctgagaagacagaggacgctttgctgaagatggagcag
tacctgctgaggaaccatgagacccgtaaatacctgcaggagcaggcgtacaggctgcag
cagggaatcgttaccacgacgacacaacagatggtggacatgatgtgtgtgaaggttcag
gatcatttaaactctctgaagttcacggaggccaacctggtgcaggaggacatgaaggtg
gccgagaatctcatgaaggacgcaagaaactcaaagactctgctccccaacctctaccac
ctgaggagttggggtttgaagggtccgtgcgtcggagccattcaggacaaactggagtcg
atggccggagaggtttccatggtgatggacgaacagctgcagacgatgctggcgtccatg
gtggacgcggccgagggtctgtgtcctcatgtgatgaagaggagcagccttcgtcaggag
ctgctgaaggccggtacgggacggatgacggttcctcgcagcttcatcaccacgacgctg
ctggagcagtccggggccgacatcatcaataagatcagtgaagtgaaactcagcatcgcc
tcatttctgtctgatcgcatcgtggatgaaatcctggagtctctgtccagatcacagcac
actctggccgaccatctgaacaggaaggtccaacctctgctgcatcatgagcctcagctg
gaggccgaagttctggacgagagcatcctgcagccggagagcaaaacagctggaggatat
ggacacctgcatggtgaggatggagggagggatggagggagggagggagagagggaggga
tggatggacacctgcatgatgacgccgaaatccaagaggaagagtattctggtccggatg
ctgcgaccggtctctgtggcttttgagatggagttcgacctggacaaagctctggaggag
gttcctatccacgttgaggacccgcctccttcttcctcacagccatcggacatgacgtca
cactgccacggagactccttccccgactctaagcccctctgtttgggtgagctgcccccc
gtggagcacatgactctggagcatcgcactaaactccggcccaagcccaagaagaggacg
aaacccagccgttctcagcgggagtctaccgtcgcctcggcaactcatgagtccgagcag
aacgtgatggagaagctggacgagggtctggaggagttcttctccaagaaagtcattaaa
cttagcttcaaacgtcctactgtgaaaggctcgtcctcgagcccacaggaaggagcagaa
aagaaacgtgaatccaggaagagcggcttctttaacctcatcaaatcccgaaacttcccc
gctcagagaaaaagccacggtgccgcctccgtcagcccgccacatccggcctcctcgccc
tccgtaaccacggtaacagaggagtcgacggctcaggcatccccgacgtcgccgcggccg
ctacaggacagagctcaatcactggacaccacagattctgagactgaagtctctccgacc
gctgctgaggaggagaaagaggaggaggcggaagagaagaatgagaatgttgagaaggag
gaggcgaccgcggagaagaaggagaaccctcatatcccccgtcatatcggtgtccctctg
atgggcatggacctgatggccgagatgaaggccaggcaggagaggaaagctgctaagaag
tctgaatcctcgctgttgcacgacaaggcgaacatgctgatgagtccaaaccagaaccgg
ctcccaggttcaaatcacccgttccacttccgccccaggtggccaaacccctgccgaccc
ccccgctgctctgggcccatgagtcccaccagtccaaccagccaaaccaatcccaccagt
ccaaccagtcccactagtccaaccaatccaaccagtcccaccagtcccagaccaaccagc
acctacgtccatgatgattctgctgagactccagcagcagtctgctcgtctcctaaagca
gcacttcctgctccctgcctgaagagggcgccatcagagcaggagagagagagcaccagc
agcaaccctggaccctcgtctccactggacgctgactgtcctgcagacggtgatgcgttc
gagtcccccgctgcagtgggagaatccagcgctggcagcagacagtattcgtctctgaag
ggttcgaccagccttcctcacagagaggaagaccgagagaaagccaagtccctccccgcc
tacgtgagacctccgtcgtccccggttaccgacacagatgtgattcctgcagcagaaacc
agatcagaggacgagtcaggagacgacagcgcctcagtgtga
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