Scomber scombrus (Atlantic mackerel): 133996891
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Entry
133996891 CDS
T10651
Name
(RefSeq) voltage-dependent calcium channel gamma-7 subunit-like
KO
K04872
voltage-dependent calcium channel gamma-7
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04010
MAPK signaling pathway
ssco04260
Cardiac muscle contraction
ssco04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133996891
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
133996891
04261 Adrenergic signaling in cardiomyocytes
133996891
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133996891
Ion channels [BR:
ssco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133996891
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GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF716
SUR7
DUF7475
DUF202
Amastin
DUF2721
Motif
Other DBs
NCBI-GeneID:
133996891
NCBI-ProteinID:
XP_062292390
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Position
16:complement(4194818..4247565)
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AA seq
308 aa
AA seq
DB search
MEMDKKMYDEWTDDEVQALLAYYITSRVRWFLLEMVRTATPFPMISLLFVFTAFVISNIG
HIRPQRTILAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPREPEQFFHYRYGWSFAF
AASSFLLKEGAGVMSVYLFMKRYAEEELYRPHPTLYRPRMSDCSDYSGQFLHPDSWPPPQ
RGRSPSDVSSDISIQLNQTPPPQPPPKGGSSSQQTPSSSGPSSAASYQLQAASSSSTSSS
YPHPLHPAATSTLPRVSHAHAHTHAHPHSQPHPHPSGPPPQSLPMAGPPSHVPPPRYHTH
MRMSASPC
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggagatggacaagaagatgtatgatgagtggaccgacgatgaggtacaggccctgttg
gcttattatatcacctccagagtccggtggttcctactcgaaatggtacgaacagccact
cccttccctatgatttccctgctcttcgtcttcaccgccttcgtcatcagcaacatcgga
cacatccggccgcagcgcaccatcctcgccttcgtttctggcatattcttcatactgtca
ggtctcagtctggtggtgggtctggtcttgtacatctccagtattaatgacgaggtgatg
aaccgacccagagagcccgagcagttcttccactaccgctacggctggtctttcgccttc
gctgcctcatccttcttactcaaagagggtgcaggagtgatgtccgtctacctcttcatg
aagcgctacgctgaggaggagttgtacaggccccacccgaccctctaccgcccccgcatg
tccgactgcagcgactacagcggccagttcctccatccggactcctggcctccacctcag
cgaggccgcagcccctccgacgtctcctctgacatttccatccagctcaaccaaactccg
cccccgcagcctccacccaaggggggcagcagctcccagcagacgccctcctcctccggg
ccgtcctccgcagccagctaccagctccaggcggcctcctcctcctccacctcctcctcc
tatccccatcccctccacccagctgccacctctaccctaccaagggtgtcccacgcccac
gcccacacccacgctcaccctcactctcaaccccaccctcatccgagcgggcccccaccc
cagtccctgccaatggcggggccgccctcgcacgtacctccacctcgctaccacacgcac
atgcggatgagcgcctcgccatgctag
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