Scomber scombrus (Atlantic mackerel): 133996906
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Entry
133996906 CDS
T10651
Name
(RefSeq) voltage-dependent calcium channel gamma-6 subunit-like
KO
K04871
voltage-dependent calcium channel gamma-6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04010
MAPK signaling pathway
ssco04260
Cardiac muscle contraction
ssco04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133996906
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
133996906
04261 Adrenergic signaling in cardiomyocytes
133996906
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133996906
Ion channels [BR:
ssco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133996906
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Gene cluster
GFIT
Motif
Pfam:
Claudin_2
PMP22_Claudin
SK_channel
Motif
Other DBs
NCBI-GeneID:
133996906
NCBI-ProteinID:
XP_062292408
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Position
16:4108917..4115671
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AA seq
290 aa
AA seq
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MWSTFLVTDEEGRTVGPVMPGAAGGVVVGGPPVGPAGLTNLMSGRTTFGGNKRRRTTSGS
ALSEAQEGKIKLAFFVAIVGVVLTVLGVGTEFWVELSPPKSFYSNQTCLTAHYGLWKGCT
KTLWVADIDPERESCGPAELPGETNCTYFKFFTTGENAVMFQKTTQKNLNIATAMLALFS
LFLMVMGATCITMSLSKEILFFLKPASVCFILSGILVLLSLVVFHQSVLAFLASDHRVPI
HHELSWSVSCIGCAGAVLIIGGVLFLLLALPCSPWQKCFPNKDSGGGSSS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcgacttttttggtgactgacgaggagggtcgcacagtgggcccagtgatgcca
ggagcggcaggaggggtcgtggttggagggcctcccgtgggcccggcgggtctgaccaac
ctgatgagcggacgcactacattcggagggaacaagcgccgcaggacgacatcaggaagc
gctttgagtgaagcccaggaaggaaagatcaagcttgcgttcttcgtggccatcgttggc
gtggtcctgacggtcctcggcgttgggacagagttctgggtggagctgtcacccccgaag
agtttctatagcaaccagacatgtctgacagctcactacggcctgtggaaaggctgcacc
aagaccctgtgggtggctgatatcgacccagagagagagagctgcggacctgctgaactg
cctggagaaacaaactgcacctacttcaagtttttcaccacgggggaaaacgctgtgatg
tttcagaagacaacacaaaagaatctgaatatagccacagccatgttggccctcttcagc
ctgttcctgatggtgatgggggccacctgcatcaccatgtctctcagcaaagagatcctg
ttcttcctcaaaccagcatcagtctgcttcatcctgtcggggatcttggtgcttctatcc
ctcgtagttttccaccagtccgtcctggccttcctagccagcgaccacagggttcccatc
caccacgagctctcctggtcggtgtcgtgtatcggctgcgcgggggccgtcctcatcatc
ggtggggtcctcttcctgctgttggcgttgccctgcagcccctggcagaagtgtttccct
aataaggacagtggaggcggcagcagcagctag
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