Scomber scombrus (Atlantic mackerel): 133997037
Help
Entry
133997037 CDS
T10651
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04146
Peroxisome
Brite
Membrane trafficking [BR:
ssco04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
133997037 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133997037
NCBI-ProteinID:
XP_062292575
LinkDB
All DBs
Position
16:16573204..16584031
Genome browser
AA seq
1250 aa
AA seq
DB search
MFRNQGIQAVTVVFNNTKNCFLHLPSKLISHLSLNENQALELSWGHGSPVFLSWTQNRTS
SSLDSHQVELCRQLGEKLGLKDGEQGFLRLCHQVSSVHQVFVEPLSTEDWEILELHSAAL
EQQLLDQIRVVFQDAVFPVWVDSHTAIYIQIASILPSVPYGRLEQFTELVVSPKSRAGIG
NLSGSSVRTSQNQHPHSGPNMPDAVGSSLESTSSVPQSHQWGGIADLKSLLRFMITGTHN
PVKELPPVPEIPGLLTDSVYRVCGAPPDSLCTISHVATGVIHLFSWSHGLNGSQSPVTYG
LLSKVPSPKEVRDRAKQAMEKKKNAGVSKVAATASGGEEMKEEQTTVVRVVCHGIDKLAS
KHSPSPSKGAIHCGGVWIPQPLAIRLNIIPHSAVRIKPVKSTIKVASTIRLQPLKPLPEE
DDEAIQTAFLGWLHTRSHEPLACVTARFGTILLHGTDAKLEFALTVLKPEPESDPPDQLF
LLALSVIQKENIQVDREPVIMPAVKTAAETPNPELPSLSILGGINELSNTGFEFISHSLL
GSPLSRELGTTGQGLQGGALLITGGKGSGKSSLSRALCRKAREDLDAHVEVVDCKKLQGK
RAETVRQMLQDIFEQAEWKQPSVVLLDDLDHMTGAQTSPEHEHGPEAMLQQHIAQSLKDV
VDEMVVHCSLVCLIITSQSEHSLHTSLTEVQGSHFVQGFVHIQPPDKAQRAEILRCLILR
KSSLSEESLQTLDLGVVARETEGYTPQDLALLLERAVHANTVQRGQGEQDVCLSWRDFAQ
ALKGFTPPSLWGADLHTPSGLGLERVGGLREVRQQLMDTIMLPAKYPILFANLPIRHRSG
VLLYGAPGTGKTLLARAVAKDSGMNYISIKGPELLSKYIGASEQGVRDVFQRAQAAKPCI
LFFDEFDSLAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRP
GRLDKSLYCPPPDLEARVEILKALSIGVPLAGDVDLQQLAAATEQFTGADLKALLYNAQL
EAVNNSLGNSTPHELTSGSDSDMSLSSMMFPNHSSGSDDSVGEGDPDVGLDQSIVLHEHS
ELQADDEHHCGNVWRLYFGSSYESELGNSPISGLNSHCVSGPNSMIHDFTGVSVRDPGSS
LPPAYMSSLQSGYEELGPEQLERLQQDINNIKNNYRRANEDCVRVHSASSQPGLLLCPAH
LNSALAVTRPSLSKADWNKYTKLYEAFGGLEDGKYIQSVTFKPGQRVTLA
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaaatcagggcatccaagccgtcacggttgtttttaacaacacaaaaaactgc
tttcttcacctcccctccaagttgatttcacatctctccctgaacgagaatcaggctttg
gagttgtcctggggtcatggatctccagtgttcctcagctggactcaaaacagaacctcc
tctagcctcgacagccatcaagtggagttgtgtcgacaactgggagagaagctgggcctg
aaagatggagaacagggcttcctgagactatgtcatcaggtctcatcagtgcatcaagtg
tttgtggagcctctgtcgactgaggactgggagatcttggagctccacagcgctgcactg
gagcagcagctgttggatcagatcagagtggtgttccaagatgccgtgtttcctgtgtgg
gtggacagccacacagccatctacattcaaatagcatctattttaccttctgtgccctat
ggtcgcctggagcagttcacagaactggttgtctctcctaagagccgagctggaattggc
aacctcagtggttcttcggtgagaaccagtcagaaccagcatcctcacagcgggccaaac
atgccagacgccgtaggatcatcattagaaagtacctcctctgtccctcaaagtcaccag
tggggtggcatagctgacctgaagagcctgttacgcttcatgataacgggtactcataac
ccggttaaagagctacctcctgtacccgaaatccctggcctcctcactgactccgtctac
agagtatgcggcgcacctcctgactctctttgcaccataagccacgttgcaactggtgtt
attcatttattttcctggagccacggattaaatggaagtcagtctccagtgacatatggt
ctgctctccaaagttccctcacctaaagaagtgagggacagagccaagcaggctatggag
aaaaagaagaacgcaggagtttctaaagttgctgctactgcgagtgggggagaggagatg
aaagaagaacaaaccacagtggtgagggtggtgtgccatggcattgataagctggcaagc
aagcacagtccaagtccaagcaagggagcgatccattgtggtggagtatggatcccacag
cccctggcgatcaggttgaatattatccctcattcagcagtaagaattaagccagtcaaa
tcaactatcaaagtagcttccactattcgcctgcagcctctaaaaccactgcctgaggag
gacgatgaggcaatccagacagcattcctgggttggttgcacactcgaagtcatgagcct
ttagcctgtgtgaccgcacggtttggcaccatcctcctacatggaaccgatgcaaagtta
gagtttgctttaactgtgctgaaaccggaacctgagagtgatcctcctgaccagctgttt
ctactagcattatctgttatacagaaggaaaatatacaggtcgacagagagccagtaatc
atgccagctgtgaaaactgcagctgaaacacctaatccagagcttccctctctcagtatt
cttggtgggatcaatgagctaagcaacactggatttgagttcatctctcacagccttctg
ggtagtcccctatcaagggagctgggtaccactggacagggactccaaggtggagcacta
ctcatcactggtggaaagggaagtggaaagagcagtctatcccgagccctgtgtaggaaa
gctagagaagatcttgatgcacatgtggaagtggtagactgcaaaaagctacaaggcaaa
agggcagaaactgtgagacagatgctacaggatatttttgaacaggcggagtggaagcag
ccctctgttgttctcctcgatgatctggatcatatgacgggggcacagacctcaccggag
catgagcatggccctgaggcgatgcttcaacagcacattgcacagagtttgaaggatgtg
gtggatgagatggtagttcactgcagcctggtgtgtctcatcatcaccagccagagcgag
cactccctccacacctcattgaccgaggtgcaggggtcccacttcgtgcagggctttgta
cacatccagccaccagacaaggcacagagagcagagatcctgcgctgtctgatcctcaga
aagtccagcctatcggaggagagcttacagactcttgacctgggagttgttgccagggag
acggaaggatacacgcctcaagacctagcgctgctgctggagcgagctgtccatgccaac
actgtacaaagaggccaaggtgaacaagatgtgtgtctgtcatggagggactttgcacag
gctctcaaggggtttacacctccctcgctatggggggcagacctccacaccccaagtgga
cttgggctcgagagagtgggagggctgagagaagtgcgacagcagctaatggacaccata
atgctccctgctaagtatccaatcctgtttgccaatcttccaattcgccatcgctcagga
gtcctgctgtatggagctccgggcacagggaagaccctgctagccagggctgtggccaaa
gacagtgggatgaactacatcagcatcaagggacctgaacttctgagtaagtacattgga
gccagtgagcagggagtccgtgatgtctttcagagagcacaggctgctaagccatgcatc
ctgttcttcgatgagtttgactctctggcccccaggaggggtcacgacaacacaggtgtg
acagaccgtgtggtcaatcagctcctcacccagctggatggtgttgagggactgcaaggt
gtgtatgtgcttgcagccaccagtcgtcctgatctgattgatccggcgctgctgagacct
ggacgactggacaagtccctctactgccccccccctgatctggaggcccgtgtagagatt
ctgaaggctttgagcattggtgtcccgctggctggtgatgtggacctgcaacagctggca
gcagcgacagagcagtttaccggggcagacctgaaggccctgctctacaatgcccagctg
gaggctgtcaacaacagcctgggcaacagcacaccgcatgagctgacgtctggctcagac
agtgacatgagtctgtcctccatgatgttcccgaaccacagcagtggctcagatgactca
gtgggagagggggacccagacgtaggtctggaccagtccattgttctccatgagcacagt
gagctccaagcagatgatgaacaccactgcggcaatgtctggagactctactttggaagt
tcctacgagtcagagttggggaattcgccaatttctggattgaactctcattgtgtctct
ggacccaactcaatgattcatgacttcacaggagtatcggtccgtgaccccggtagctca
ctgccccctgcctatatgtcctcccttcagagcgggtatgaagagctcggcccagagcag
ctggagcgcctccaacaagacatcaataacatcaagaacaactacaggagagccaacgag
gattgtgtccgggtgcattcagcctccagccagccgggcctgctgctgtgtccagctcat
ttgaactctgccttggcagtgaccagaccatctctgagcaaagccgactggaacaaatac
acaaaactgtatgaagcctttggaggtctggaagatggaaaatatattcagtcagtcaca
tttaaaccaggacaacgtgtgactttagcttga
DBGET
integrated database retrieval system
