Entry |
|
Symbol |
ago4
|
Name |
(RefSeq) protein argonaute-4 isoform X1
|
KO |
K11593 | eukaryotic translation initiation factor 2C |
|
Organism |
ssco Scomber scombrus (Atlantic mackerel)
|
Brite |
KEGG Orthology (KO) [BR:ssco00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ssco03019]
133997059 (ago4)
03036 Chromosome and associated proteins [BR:ssco03036]
133997059 (ago4)
Messenger RNA biogenesis [BR:ssco03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133997059 (ago4)
Chromosome and associated proteins [BR:ssco03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133997059 (ago4)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133997059 (ago4)
microRNA pathway
RISC loading complex
133997059 (ago4)
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
16:complement(9241234..9266681)
|
AA seq |
883 aa
MEAVGPGPPAPPPSLFQPPRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDIDIKPEKRP
RRVNREVVDTMVRHFKMQIFGDRQPGYDGKRNMYTANPLPIGRDRVDLEVTLPGEGKDQT
FKVSLQWVSVVSLQMLLEALSGHLNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSPPEG
YYHPLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPVIEFMCEVLDIQNINEQT
KPLTDSQRVKFTKEIRGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLENGQAMECT
VAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKA
TARSAPDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNDMTEVTGRVLPAPMLQYGGRVS
TDTGRDCGRGLSPQNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKS
FTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFKHLKMSYVGLQLIVVILPGKTPVY
AEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQRPSVFQQ
PVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHPSRYCATVRVQTSRQDMSQVNTEQLFSQ
EVIQDLTNMVRELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKACISLEE
DYRPGITYIVVQKRHHTRLFCSDKAERVGKSGNVPAGTTVDSTITHPSEFDFYLCSHAGI
QGTSRPSHYHVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYH
LVDKDHDSAEGSHVSGQSNGRDPQALAKAVQIHYDTQHTMYFA |
NT seq |
2652 nt +upstreamnt +downstreamnt
atggaagcagtcggacccggcccgcccgcccctcctccctctctgtttcagcctccgcgg
cgtcccggcctcggcacggtggggaaacccatccggctccttgccaaccacttccaggtg
cagattcccaagattgatgtctatcactatgatatcgacatcaagcctgagaaacggccg
cggagggtcaacagggaagtggtggacaccatggtgcggcacttcaagatgcagatcttt
ggagaccgacagcctggctacgatgggaagaggaacatgtacacagcaaatccactgcct
atcgggagagacagggtggatctggaggtgaccctgcctggtgaggggaaagatcagacg
ttcaaggtgtccctgcagtgggtgtccgtggtcagtctccagatgttgctcgaagctctc
tcgggtcaccttaacgaggtccccgaggactccgttcaggctctggatgtcatcacgcgg
catctgccttccatgaggtatactccagtggggcgttcgtttttctcccctccggagggc
tactaccatcctctgggtggagggagggaggtgtggtttggtttccatcagtccgtccgt
cctgccatgtggaacatgatgctcaacatcgatgtgtcggccactgctttctaccgtgct
cagcctgtcatagagttcatgtgcgaggtgctagatattcagaacatcaacgaacaaacc
aaaccgctgactgactcccagcgtgtcaaattcactaaggaaataagaggcttaaaagtt
gaggtcacacactgcggtcagatgaagaggaaatatcgtgtgtgtaatgtcacgcgccga
cctgccagccaccaaacgttccccttacagctcgagaacggccaagccatggagtgcaca
gtagctcagtatttcaagcagaagtacaatctgcagctcaagtatccacatttgccctgt
ttgcaagtaggacaggaacagaagcacacctatcttcccttggaggtgtgtaacatagta
gcaggccagcgctgtatcaagaagctaacagacaaccagacatccaccatgatcaaagct
acggcgcgctcggcccctgacagacaagaagagatcagcagactggtcaaaagcaacagc
atggttgggggcccggacccttatctgaaggaatttggcattgtggtgcacaatgacatg
acagaggtgacggggcgtgtcctcccggcacccatgctacagtatgggggccgagtgagt
acagacaccgggagggactgtggcaggggactctctccgcagaataaaaccgtggccacg
cccaatcagggcgtttgggacatgagggggaagcagttctatgctggcatcgaaatcaag
gtctgggccgtggcctgcttcgctccacagaaacaatgtcgagaggacctgctcaagagc
ttcactgaccagctacgaaagatctcaaaggacgctgggatgcccattcagggtcagcca
tgtttctgtaaatacgcccaaggagcggacagcgtggagcctatgttcaaacacctcaag
atgtcttacgtaggcctgcagctgattgtggtcatcctgcctggcaaaacacctgtctac
gctgaggtgaagcgggtgggagacaccctcctcggcatggccacccagtgcgtacaggtg
aagaacgtagtgaagacgtccccacagaccctctccaacctctgcctcaagatcaacgcc
aagctgggcggcatcaacaacgtcctggtgcctcatcagaggccatccgtgttccagcag
cctgtcatcttcctgggtgcagacgtcacacatcctccagcaggtgacgggaagaagccg
tccatcgcagcggtggtgggcagcatggatggtcaccccagccgttactgcgccacagtg
agagtccagacatctcgacaggacatgtcccaggtaaatacggagcaactctttagccag
gaggtcattcaagacttgaccaacatggtgcgggagctgctcatccagttctacaagtcg
acacgcttcaagcccacacgcatcatctattaccgtggcggcgtgtcggagggacaaatg
aaacaggttgcatggccggagctgatagccataaggaaggcatgtatcagtctggaagag
gattacaggccgggtattacctacattgtggttcagaaacgccaccacactcgtcttttc
tgctctgacaaagctgagagggtcgggaagagtggtaacgtcccagctggcacaacagtg
gacagcaccatcacacatccgtccgagttcgacttctacctgtgcagccatgctgggatc
cagggaacaagtcgtccctcccactaccacgtcctgtgggatgacaactgtttcacggcc
gatgaactgcagctcctcacctaccagctgtgccacacctacgtccgctgcacgcgctcg
gtctccatcccagcaccggcctactacgccagactagtggctttccgtgcccgctaccac
ctggtggacaaagaccatgacagtgctgaaggcagccatgtatcgggccagagtaacggc
cgggacccccaggcgttggccaaggcagttcagatccattatgatacccagcacaccatg
tacttcgcctga |