Scomber scombrus (Atlantic mackerel): 133997063
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Entry
133997063 CDS
T10651
Symbol
rab42a
Name
(RefSeq) ras-related protein Rab-42a
KO
K07925
Ras-related protein Rab-39B
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133997063 (rab42a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133997063 (rab42a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ssco04031
]
133997063 (rab42a)
Membrane trafficking [BR:
ssco04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
133997063 (rab42a)
GTP-binding proteins [BR:
ssco04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
133997063 (rab42a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
SRPRB
Motif
Other DBs
NCBI-GeneID:
133997063
NCBI-ProteinID:
XP_062292604
LinkDB
All DBs
Position
16:complement(25291997..25297577)
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AA seq
218 aa
AA seq
DB search
MDILWQYQFRIILLGDSTVGKSSLLKRFTDGIYSDVADPTVGVDFYARSLDIEPGVKIKL
QLWDTAGQERFRSITTSYYRNSVGGLLVFDLTNRKTFDHVKEWHKEVSEHILPHHMVYIL
IGHKSDLNKDRKVSRDDAEQLAAELGIRYVETSAKCNSNVDRAFELLTKDIYELMKMGEI
VTRDGWDGVKSGLTAKVLYPADDEEELAAATAEKGCHC
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggatattttgtggcaatatcagttcaggatcattctactcggggattcaacagtgggg
aagtcgtcgttgctgaagcgcttcacggatggaatttacagcgatgtggcggatccgacg
gtcggggtggatttttacgcccgctcgcttgatatcgagcccggggtgaaaatcaagctt
cagctgtgggacaccgctggtcaggaacgattcaggtccatcacaacatcatactaccgt
aactctgtgggggggctgctagtgttcgatctcaccaatcgcaagacctttgaccatgtg
aaggagtggcacaaggaggtgagtgagcacatcctgcctcaccacatggtctacatcctc
atcggccacaagagcgacctcaacaaggaccgtaaggtgagccgggacgatgcggagcag
ctcgcggccgagttgggcatccgctacgtggagacgtcggccaagtgcaacagcaacgtg
gaccgggccttcgagctgctgaccaaggacatctacgagctgatgaagatgggggagatc
gtcacccgcgacggctgggacggggtgaagagcggcctcaccgccaaggtcctctaccct
gctgacgacgaagaggaactagctgccgcgaccgccgaaaagggctgccactgctga
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integrated database retrieval system
