Scomber scombrus (Atlantic mackerel): 133997083
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Entry
133997083 CDS
T10651
Symbol
tbc1d5
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 5
KO
K18469
TBC1 domain family member 5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133997083 (tbc1d5)
Membrane trafficking [BR:
ssco04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133997083 (tbc1d5)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF7615
Motif
Other DBs
NCBI-GeneID:
133997083
NCBI-ProteinID:
XP_062292623
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Position
16:18454720..18475672
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AA seq
895 aa
AA seq
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MQHPNFETRHPLQTDEQQETGFDPLHNFNKNRSRGSLDSSGYSQSQSTFLSYRKEWDDLF
LNSNYLARIRQAGINGRLRSSRFRSVCWKLYLEALPEDKSQWINKTKELRAQYEKIKETH
ITNPRKAAGQQDLVVNNPLSQDEGSLWNKFFQDKELKGMIKQDVLRTFPEIRYFQDEDVR
TKLTDILFCYARENEQLLYKQGMHELLAPIVFVLHCDHQAFQHASETASPSEEMKCLLNP
LFLEHDAYALFSQLMDTAEPWFSSFEREVRRGKEEMLTSIPFARPQDAGPSVAIVTKVNR
IQDQLVKKHDVELHMHVNRLEIAPQIYGIRWVRLLFGREFPLQDLLVVWDALFADSITLD
LVDYIFVAMLLYIRDALIASNFQTCLGLLMHYPPIGDINALLQKALFLRDPKNNPRPVNY
QFQQNLDYYKTRGADLMXKTRSGSSVKTAPLNINKVSSSLLSFGRKLIAPAISGGSSGIS
PINSEVHSSSSSSSSTSPASAPAPILSHPLAEPPSGQAPLQSQSQSQHYRLLKSESMPVH
LSKDVVSGGVSQVSLPAQTHTDTEGQSSRTVSSSPSIESFSGGRGQATASPPLPPSRGSD
VSTSSPPLSATKKESFFNITRSRSHSKTMGKKEAEEDLEAQVSFLQGQINDLEAMSKYCA
KMMNNHICKIQEVILEEHLKKEDEVLVSLAGLKQIKDILKGALRFNQSLLEAEENEEITI
ADDHYTLTAAAENALSSNSHHGDDQQPGDSRPSRDSDLDGSVSTDEKEEEEQAMTPPEQQ
VASSLGSEGKNWDDYILVSQEEDLQAAEGAGGGGGGGGGGEEGEEAEEGGVGRAAAEHTP
PIRRGRGMVRMEPEGAAGTFHDPLMAGPTSGSSSPDEGSTNSKDSDFTIVNPNDL
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccccaactttgagacccgccacccgctccagacggacgagcagcaggagacg
ggcttcgacccgctccacaatttcaacaagaaccgcagcagaggatctcttgacagcagt
ggttactcacagtctcagtcaaccttcctctcatataggaaagaatgggacgacttgttc
ctcaacagtaattacctggccaggatccggcaggcaggcatcaacggtcgactgaggagc
agccgctttcggagcgtatgctggaagttgtatttggaggctcttccagaagacaagagt
cagtggatcaacaagaccaaggagctccgagcccagtatgagaagattaaagaaacgcac
atcacgaaccctcgcaaggctgcaggccagcaggacctggtggtcaacaacccgctgtca
caggatgaggggagcctgtggaacaagttcttccaggataaagagctgaaggggatgatc
aaacaagatgtgttgagaacgttccctgagattcgttacttccaagacgaggacgtgagg
accaagctgacggacatcctcttctgttatgcccgagaaaatgaacaattactttataaa
cagggtatgcacgagttactggctcccatagtgtttgtgctgcactgtgaccatcaagcc
ttccagcatgccagcgagactgccagccccagtgaggagatgaagtgtctgttgaaccca
ctgttccttgagcatgatgcctatgcattgttctcccagctgatggacacagcagaacca
tggttctccagctttgagagggaagtgaggaggggaaaagaagagatgctgaccagcatc
ccatttgctcggccccaggacgcaggaccatctgttgccatagtgaccaaagtcaaccgc
atccaggaccagttggtgaagaagcatgacgtggagctgcacatgcacgtcaaccggctg
gagatcgccccacaaatctatggcatccggtgggtacgtctgctgtttggccgcgagttt
ccacttcaggacctactggtggtgtgggacgcactgtttgctgacagcatcactctggac
ctggtggactacatctttgtggccatgctgctctatatccgagatgccctcattgcaagt
aacttccagacctgcctgggcctgttaatgcactaccctccaataggagacatcaacgct
ctgctgcagaaggctctgttcctccgagatcccaaaaacaatccacgacctgtaaactac
cagtttcagcagaacctggattactacaaaacaaggggagctgatctgatgnacaaaaca
cgctcgggctccagtgtaaaaacggctcccctcaacatcaacaaagtctccagcagcctg
ctgagcttcggcaggaagctcattgctccagccatttcgggtggttccagcggcatctca
ccaatcaacagtgaggtacactcctcctcctcctcctcgtcttccacctctcctgcctca
gcccctgcgcctatcctgagtcacccacttgctgagcctccatcaggccaggcgccactg
cagagccagagccagagccagcactaccgcctgctcaagtctgagagcatgcctgttcat
ctcagcaaagatgtagtttcaggtggagtgtctcaggtctctctcccagcccagactcac
actgacacagaaggccaaagctccagaacagtaagttcctctcccagcatagaaagcttc
tctggtgggcgtggtcaggccactgcctctccacccctccccccatccagagggagtgat
gtcagcacttcatcacctcccctttccgccaccaagaaggagtccttcttcaacatcact
cgctcacgttcccacagcaagaccatgggcaagaaagaggcggaggaggacctggaagcc
caggtgtctttcctgcagggtcagatcaacgacctggaggctatgagcaaatactgtgcc
aagatgatgaacaaccacatctgtaaaatccaggaagtgattctcgaggaacatttgaag
aaagaagatgaggtcttggtttcactggcaggactcaaacagattaaagacatcctgaag
ggggcactgcgcttcaaccaaagcctgctggaggctgaagagaacgaggagatcaccatc
gctgacgatcactacaccttgacagcggctgcggaaaatgctctgagttccaacagtcac
cacggtgacgaccagcagccaggcgacagcagaccgagtcgagactccgacctcgacggg
agcgtgagcacggatgagaaagaagaggaggagcaggcgatgaccccccctgagcaacag
gtggcatcttctctcggctccgagggtaagaactgggacgactacatccttgtatcccag
gaagaagacctgcaggctgccgagggagcaggaggaggaggaggaggaggaggaggagga
gaagaaggagaagaagctgaagaaggtggagtaggaagggctgcagccgagcacacccct
ccgatcaggcgaggccgcggcatggtgcgaatggagcctgagggtgcggcagggaccttc
cacgaccccctgatggccggccccacctccggctcctccagcccagacgagggctccacc
aacagcaaggactctgacttcaccatcgtcaatccaaatgacctgtga
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