Scomber scombrus (Atlantic mackerel): 133997167
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Entry
133997167 CDS
T10651
Name
(RefSeq) tubulin alpha-1C chain-like isoform X1
KO
K07374
tubulin alpha
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04145
Phagosome
ssco04210
Apoptosis
ssco04530
Tight junction
ssco04540
Gap junction
ssco04814
Motor proteins
ssco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133997167
09143 Cell growth and death
04210 Apoptosis
133997167
09144 Cellular community - eukaryotes
04530 Tight junction
133997167
04540 Gap junction
133997167
09142 Cell motility
04814 Motor proteins
133997167
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133997167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133997167
03036 Chromosome and associated proteins [BR:
ssco03036
]
133997167
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133997167
04147 Exosome [BR:
ssco04147
]
133997167
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133997167
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
133997167
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
133997167
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133997167
Exosomal proteins of other body fluids (saliva and urine)
133997167
Exosomal proteins of colorectal cancer cells
133997167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin_C
Tubulin
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
133997167
NCBI-ProteinID:
XP_062292688
LinkDB
All DBs
Position
17:complement(14945344..14948203)
Genome browser
AA seq
412 aa
AA seq
DB search
MPSDKTIGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITG
KEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLME
RLSVDYGKKSKLEYAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
NLDIERPTYTNLNRLMSQIVSSITASLRFDGALNVDLAEFQTNLVPYPRIHFPLATYAPV
ISAEKAYHEQLTVAEITNACFEPSNQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI
KTKRTIQFVDWCPTGFKVGINYQAPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGMDSVEEKRKQN
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcgacaagaccattggaggaggagacgattccttcagcaccttcttcagtgag
actggagctggaaagcacgtccccagagctgtttttgtggacctggagcccactgtcatc
gatgaggtgcggactggtacctaccgccagctctttcaccctgagcagttgataactggt
aaggaggatgctgccaacaactacgcccgtggtcactacaccatcggcaaagagatcatt
gacctggtgctggacaggatccgcaagctggctgaccagtgtaccggccttcagggcttc
ctggtcttccacagcttcggaggtggtaccggctctggtttcacctccctgctgatggag
cgtctctctgtcgactacggcaagaagtcgaagctggagtacgccatctaccccgcccct
caggtgtccactgctgtggtggagccctacaactccatcctaaccacccacaccacctta
gagcactctgactgtgccttcatggtggataacgaggccatctacgatatctgtcgtagg
aacctggatatcgagcgacccacctacaccaacctgaacaggctcatgagtcagatcgtg
tcctccatcactgcctcccttcgtttcgacggcgctcttaacgttgatcttgcggagttc
cagaccaacctggtgccatatccccgtatccacttccctctggccacctacgctcccgtc
atctccgcggagaaggcgtaccacgagcagttaacggtagcagagatcaccaacgcctgc
ttcgagccgtctaaccagatggtgaaatgtgatcctcgccacggcaaatatatggcatgc
tgcctcttgtaccgtggtgatgtggtgcccaaagatgtcaacgctgccattgccaccatt
aagaccaagcgcaccattcagtttgtagactggtgccctactggtttcaaggtgggtatc
aactaccaggcgcccactgtagtccccggtggagacctggcaaaagtccagagggccgtg
tgcatgctgagcaacaccaccgccatcgcagaggcgtgggctcgactcgaccacaagttt
gacctgatgtacgccaaacgcgccttcgttcactggtatgtgggtgaggggatggaagag
ggggagttctccgaggctagagaggacatggcggctctggaaaaggattatgaggaggtg
ggaatggactctgttgaggagaagagaaaacaaaactaa
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