KEGG   Scomber scombrus (Atlantic mackerel): 133997171
Entry
133997171         CDS       T10651                                 
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco00100  Steroid biosynthesis
ssco01100  Metabolic pathways
Module
ssco_M00101  Cholesterol biosynthesis, FPP => cholesterol
Brite
Enzymes [BR:ssco01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     133997171 (fdft1)
Prenyltransferases [BR:ssco01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   133997171 (fdft1)
SSDB
Other DBs
NCBI-GeneID: 133997171
NCBI-ProteinID: XP_062292697
LinkDB
Position
17:15037394..15046162
AA seq 457 aa
MAGACCKCQVSLTVFKRSLSVAPRGSGSAARSLLPGWRMAERGLQEAARPSSALRPAGLY
RHTVFSYLSCQESMSDSLRTCYLYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTV
EDDMSIPLDKKVPMLNDFHTYLYQDEWSFSESQEKDRQVLEDFPTISLEFRNLALEYRDV
ISDICHRMGVGMAEFLEKKVGSMKEWDQYCHYVAGLVGIGLSRLFSASQLEDPEVGRDTE
LANSMGLFLQKTNIIRDYLEDTQEGRAFWPQEAWSQFAGRLEDLAQPEKLESALSCLNLL
VTDALRHVPDVITYLSRLRNQSVFNFCAIPQVMAIATLSLCYNNPLVFQRVVKIRKGQAV
TLMMEATNMRAVQTIITQYSQEILQKVSLTDPSRDKTLHILALIREKSALSQSSLPSRTH
HLSPMYLSAAMLLAALSWQYLSTTAAQAQGTNDMQGQ
NT seq 1374 nt   +upstreamnt  +downstreamnt
atggccggagcttgctgcaagtgtcaagtctctttaaccgtgttcaagcgctctctctcg
gtggcgccgcggggctctgggtccgctgcacgatcgctcctaccgggctggaggatggcg
gagcggggcctgcaggaggccgcccgaccctccagcgccctaagacccgcaggcttatac
cgacacacggtcttctcttatctctcctgccaggagtccatgagcgacagcctgcggacc
tgctacctgtacctgaaccaaaccagccggagttttgcagctgtgattcaagcgctggac
ggagagttaagacatgcagtttgtattttctacctggtcctgcgggcactggacacagtg
gaggatgacatgagcatccctctggacaagaaggtacccatgctgaatgatttccacacc
tacctctaccaggatgagtggagtttcagtgagagccaggagaaagaccggcaggttctg
gaggatttccccacgatatcactggaattcagaaaccttgctcttgagtacagagatgtc
atctcagatatctgccaccgtatgggagtaggaatggccgaattcctggagaagaaagta
ggatccatgaaggagtgggaccagtattgccactatgtggcagggctggtcggcatcgga
ctgtctcgcctcttctccgcgtctcagctcgaggaccctgaggtggggcgtgacaccgag
ctggccaactccatgggactgttcctccagaagaccaacattatccgagactatctggag
gacacacaagaggggcgtgctttctggccacaagaggcgtggagccagttcgcaggtcgc
ctggaggacttggctcagccagagaagttggagtcggctctgtcctgcctcaacctgctg
gtcactgatgctctgcgccacgtcccagatgtcatcacctacctgtcccgcctgcggaac
cagagcgtcttcaatttctgtgccattccacaggtgatggcaatagcgacactatctttg
tgctacaacaacccattggtgttccagcgagtagtaaaaatccgaaagggacaagctgtc
acactcatgatggaggccaccaacatgagagctgtgcagaccatcatcacccagtacagc
caggagattctacagaaggtctccctcactgacccgtcacgggacaagaccctgcacatc
ctggcgctaatccgagagaagtccgccctgtcacagtcgagcctcccctccaggacccac
cacctttcacccatgtacctatctgctgccatgctgctcgccgctctcagttggcagtac
ctcagcaccactgcagcacaggcgcagggtaccaacgacatgcagggacagtga

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