Scomber scombrus (Atlantic mackerel): 133997196
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Entry
133997196 CDS
T10651
Symbol
ino80
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133997196 (ino80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133997196 (ino80)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
133997196 (ino80)
INO80 complex (yeast)
133997196 (ino80)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
133997196
NCBI-ProteinID:
XP_062292739
LinkDB
All DBs
Position
17:complement(11821759..11858699)
Genome browser
AA seq
1571 aa
AA seq
DB search
MASGQGGRLDAGASGSSGLAKPLYLQRLERSLRLDSFLRHTAAIFNRDITSDDSDDSDGA
LGTGLSLDPSTQHTALTVKSEPCEQGEGLAEGKPLNGVLLQGKDQKADKTNLYNFSKLKK
NRRWLKSILLSDDTTDSDTDSDDSDFSLSREELHDMLRLHRYTRQHQSKFHSDRELHQYQ
FYSTGLLSTHDSFYEQQRHLLGPKKKKIKDEKKFKAKLKKVKKKKKRGEGDFLDEGRPYV
TKIFAKFSHDAPLPMVKKKHLTVEQLNARRRKVWLTIAKKEIPKTFKQKTSAKNLVLTNA
KKLAHQCMREVRRAAIQAQKNCKETLPRARRLTKEMMLYWKKYDKVEKEHRKRAEKEALE
QRKLDEEMREAKRQQRKLNFLITQTELYAHFMSGKASKGGPGGDKAQEEILKKLDDSGAQ
RQIDIGGGVMVNMGQEDYDSEYYKSQALRNAKEAYKIHQEKTRMFDEEAKDSRSASLHAA
VASFSGAGSGFGESYSLANPSIHAGEEIPQPTIFNGKLKGYQLKGMNWLANLYEQGINGI
LADEMGLGKTVQSIALLAHLAERDNIWGPFLIISPASTLNNWHQEFTRFVPKFKVLPYWG
NPHDRKVIRKFWSQKTLYTQNAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSS
TSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESH
AENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILTYCQLTSRQRLLYQALRN
KISIEDLLQSSMGTAQQSHTTTSSLMNLVMQFRKVCNHPDLFERQETRSPFHMSLKPYIM
SKFLYRHGLTHNQAKNKLLQVLLSPFSPNHIQQSLFHRKGDDKGSCFSFLRFIDVSPAEM
SNLMLQGTLVRWLALFLSLKAAYRLHCQRLFGLEEEGQEEDREGEGDRGRLRPRSRCLSR
KDLILWLNRPTAFPNTHTSPVLQDLVFTALRPGMMGHTDATIHSRNSATSTLRPCQPTLP
PKFLLTATPRVTAVPMERYCDDRSAEYEWRVTRSGGGAVFKQCFLYGNPDLASDWRTRAN
AFYPQCPGGVMALSPRHGWSYIRIPDKESLITESGKLHTLDILLSRLKAQGHRVLIYSQM
TRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLT
AADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICQGTIEERILQRAKEKSEIQR
VVISGGNFKPDTLKPKEVVSLLLDDDELEKKLRQRQDEKRQQEESSKVKERKRKREKYAE
KKKNEESENKRRKEVNLVISHAPSADNSNLSADGDDSFISVEMDSAMPSPFSEISLSSEL
QPGSLPPDADADESSSDMLVIVDDPVSSAPQSRATNSPASVSGSVSDNMNGVSTSDTISP
GRGRSGRSRGRPKGSGGGAKSGGKGRGRKSTAGSAAAMAGAMAGAAAASAAAYAAYGYSV
SKAGLSASSPLQPSLGRSGTSPAFNPSRSSSPQAKGGTSTPSPHKQLTHSHHHSSHGAVR
KGKGPGGPGAR
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagggcagggtggccggctggatgctggagcatcagggagctctggcctggcc
aaacctctctacctgcagcgtttggaaagatccctgaggctggatagcttcctgcgccac
actgccgcaatcttcaacagagacataaccagtgatgacagtgatgacagcgatggtgca
ctgggaacaggcctttccctggacccctccactcaacatacagctttgacagtgaaaagt
gagccatgtgagcaaggggaagggttggcagagggtaagccgctcaatggagttcttctg
caaggtaaagaccaaaaggcagataaaacaaacctctacaatttctcaaagctaaagaag
aacaggagatggctgaagagtatcctgttgagtgacgacaccacagattcggacacagac
tccgatgactctgacttcagtttgtcccgggaggagctgcatgacatgctaagactacac
cgttacaccaggcagcatcagagcaaattccacagtgaccgcgagcttcaccagtaccag
ttttacagcactggactcctctctactcatgattccttctatgaacaacagcgccatcta
ttgggcccaaagaagaagaaaatcaaagatgagaaaaagttcaaagccaaactgaaaaaa
gtgaagaagaaaaagaaacggggagagggagattttctggacgaggggcggccttatgtc
accaagatcttcgcaaagttttcccacgatgctccgctgcccatggtgaagaagaaacat
cttaccgttgagcaacttaatgcacgtagacgcaaggtgtggctcaccatcgccaaaaag
gagatccccaagacttttaagcagaagacctctgctaagaaccttgtcttgaccaatgct
aaaaagttggctcaccagtgcatgcgagaggtccggcgtgcagctatccaagcccagaag
aactgtaaagagacgttacctcgggctcgccggctcaccaaggagatgatgctttactgg
aagaaatatgacaaagtagagaaggagcacaggaagagggcagagaaggaagccctggaa
caacgtaaacttgacgaggagatgagagaggccaaacgtcagcagcgtaaactgaatttc
ctcatcacccagacagaactgtatgctcatttcatgagcggtaaagccagcaaagggggt
ccagggggagataaagctcaggaggaaattctgaaaaagcttgatgacagtggggcgcag
agacaaattgacattggaggaggcgttatggtcaatatgggacaggaggactatgatagt
gaatactacaagtcccaggccttgaggaacgctaaagaagcctacaagattcatcaagaa
aaaacgcgaatgtttgacgaggaggcgaaggacagccgcagtgcatctctccatgcagct
gttgcatcgttctcaggcgccggctccggatttggagagagctacagccttgccaaccca
tccatacacgcaggtgaagaaattcctcagcccaccatcttcaacggcaagctcaagggt
taccaactcaaaggcatgaactggctcgccaacctctatgaacagggaatcaatggaatc
ctggcagatgagatgggacttgggaagacagtccagagtattgccctgttggcccaccta
gcagagagagacaacatctggggtccattcctgatcatctctcccgcatccacgctcaac
aactggcaccaggagttcacccgctttgtgcccaaattcaaggtgttgccatattgggga
aaccctcacgatcgcaaagttattcggaaattttggagccagaaaaccctttacactcaa
aatgcaccattccacgtggtgatcacaagctaccagctcgtggtccaggatgtcaagtac
ttccagagggtcaaatggcagtacatggttctggatgaggcccaggcactgaaaagcagt
accagtgtccggtggaaaatcctccttcagttccagtgtcgaaacagactgctgctcact
gggacgcccattcaaaacacaatggctgagctctgggccctgctccacttcatcatgcct
acactgtttgattcccatgaagagtttaacgagtggttctctaaggacattgagagccat
gctgaaaacaagtctgccatcgatgagaaccaactttccagactgcatatgatcctaaag
cctttcatgttgcgcaggataaagaaggacgtggaaaacgagctttcggacaagatcgag
atcctgacctactgccagctgacatcccggcagaggttgctctatcaggctcttagaaac
aagatttctattgaggatctacttcagtcctccatgggaacggcccagcagtcccacacc
accacatcctccctcatgaacctggtcatgcagttcaggaaggtgtgtaatcaccccgac
ttgtttgagcgccaggagacacgctctcctttccacatgtccctcaagccctacatcatg
tctaagttcctctaccgtcatggcctcacacacaaccaggccaagaacaaattacttcaa
gtgctgttgtcccccttctctccaaatcacatccagcagtctctattccacaggaaaggt
gatgacaaaggaagttgtttctccttcctgcgcttcatcgatgtgtcaccagccgagatg
tccaatctcatgctacaaggcaccttagtcagatggttagccctttttctctccctgaaa
gctgcataccggctccactgtcaacgcctgtttggcctcgaagaagaagggcaggaggaa
gacagagaaggggagggggacagggggaggttacggcccaggagcagatgtctgtctcgc
aaggatctgattctgtggttgaacagacccactgccttccccaacacacacaccagccct
gtcctacaggatctggttttcacagccctcagacccggcatgatgggacacacagatgca
accatccacagtagaaattctgccacctccacgctgcggccctgccagcccacactgcca
cccaagttcctgctcaccgccacacccagggtgacagcagttcccatggagcgttattgt
gacgaccgcagtgccgagtacgagtggcgggtgacgcgcagcggagggggcgcagtcttt
aaacagtgtttcctctacggcaaccctgatcttgcctcagactggcgcacgagagccaat
gccttttacccacaatgccctgggggtgtgatggccctctcccctcgccatggatggtcg
tacattcggatacctgataaggagagcctgatcacggaaagtggcaaactccacaccttg
gatatcctgttgagtcgtctaaaggcccagggacacagagtcctcatctactcccaaatg
actcgcatgatagacctgctcgaggagtacatggtttatcgcaagcacacctatatgcgc
ctcgatggatcctccaagatttcagaacgcagagacatggtggctgacttccagagccgg
acggatatctttgtctttctactgagcacgagggccggagggctgggcattaacctgact
gctgctgacactgttatcttctatgacagcgactggaaccccacggtggaccagcaggcc
atggacagggctcacagactgggtcagaccaagcaggtcaccgtttatcgcctcatctgc
cagggcaccatcgaggagaggatcctgcagcgggccaaggagaagagcgagatccaaagg
gtggtgatctctggaggcaacttcaaaccagacacactcaaacccaaagaggtggtcagc
ctgctgttggacgatgatgagctggagaagaaactgcgtcagagacaggacgagaagagg
cagcaggaggagagcagcaaggtgaaagagcgcaagagaaagagggagaagtacgctgag
aagaagaagaatgaggagtcggagaacaagaggagaaaggaggtgaacttggtcatctct
catgcaccttcagccgacaactccaacctgtccgcggacggggacgactccttcatcagc
gttgagatggactcagccatgcccagcccctttagtgagatctccctgagcagcgagctc
cagcccggttcattgccgccagacgctgacgcagatgagagcagcagcgacatgttggtc
attgtggacgacccggtttcatctgcgccgcagtctcgtgccaccaactccccggcttct
gtgtctggatcagtctctgacaacatgaacggtgtctcaacctcagacacaatcagtccc
ggcagaggcaggtctgggcggagtcgaggccgccctaaaggatcaggtggcggagcgaag
tcgggagggaaaggacgtgggcgcaaatcaacagcgggtagtgcagcagctatggcagga
gcaatggctggtgcagcagctgcatcagcagcagcatatgctgcttacggctacagtgtt
tctaaagctggcctctctgcgtccagccccctgcagccttccctgggccggtctggtacc
agccccgccttcaaccccagcagaagctcgtctcctcaggccaaaggaggcacctccacc
ccgagcccacacaaacagctgacccacagccaccaccacagcagccacggtgcagtcagg
aaggggaagggccctggtggtcctggggctcgatga
DBGET
integrated database retrieval system
