Scomber scombrus (Atlantic mackerel): 133997213
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Entry
133997213 CDS
T10651
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
133997213 (gpcpd1)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
133997213 (gpcpd1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
PI-PLC-X
Motif
Other DBs
NCBI-GeneID:
133997213
NCBI-ProteinID:
XP_062292766
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All DBs
Position
17:complement(10192044..10211109)
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AA seq
674 aa
AA seq
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METTEVTLAIRGETSPGEVIAVTGSCETLGSWSPQKAVILHPDGNDGSTWTTTITIPQGT
VSKYRYFKGFFLESKSADGPRQVIVKMWETNQQARTMSPTASHLNIDDGQFGIHNGVNCV
DSGWLTCQTEVRLRLHYSRTSPVSITKKKYKKSCFRIKLTLEGIEEEEDEEENDLSASSW
HKINSTLEISMISANGYKSRHSQPECGYALEPSQWTEYSIHTMDPDNLELIFEFFEEDLG
EHVVHGDTLPGQVGTACLLSSSFLENGKDIGVATIPIMGRNSRQTIGKVKVDYLVIRPIQ
GLQFDMSSSFTKYWKKRSTLDVGHRGAGSSHAAKHHRIRENTIASFKSAAKHGAAYVEFD
VHLSKDAVPIVYHDLTCCIATKKKKDSTSLELIEVPVKDLTFDQLQLLKLAHATAIKGND
HKDLLDDEEEIDEYQPFPSLSQIFQAIPEHVGFNIELKWISQMKDGSWDGNLPSYFNMNT
YLDTILSCVLQKGGKRRIVFSCFDPDICTMVRQKQNKYPILFLTQGISEKYPELMDIRCQ
TTQIAMSFAQSENILGISAHTEELLKHLSYIGEAQAKGLVVFSWGEDNNDHQNRKKLREQ
GIDGLIYDSICDEKGEQPNIFQVEEHHSMQEVITEETLKSSSCSCYSIPCSIAPCNDSKT
RTGSAESDSGLSSS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggagaccactgaggtgactttggctatcagaggagaaacatccccaggtgaggtgatt
gcagttactggtagctgtgaaaccttggggagctggagtcctcagaaagctgtgatctta
catcctgatggaaatgatggaagtacttggacaacaaccatcactatacctcagggaact
gtttccaagtaccgctatttcaagggcttctttctggagtcaaagagtgcagatggtccc
cgtcaagtgatagtcaaaatgtgggagaccaatcagcaagcccgcacgatgagccctaca
gcctcacacctgaatattgatgatggacaatttggaattcacaatggggtgaattgtgtt
gactctgggtggctgacgtgccaaacagaggttcgcctgcgtctgcactattctaggacg
tctccggtgtccatcactaagaagaaatacaagaagtcttgcttcaggatcaaactaaca
ttagagggcattgaggaggaggaagacgaggaggaaaatgatctcagtgcttcatcatgg
cacaagataaacagcactctggagatcagtatgatcagtgccaatggctataagtcgcgc
cactcgcagcctgaatgtgggtatgctctggagccctcacagtggactgagtacagtatc
cacacgatggacccagacaacctagagctcatcttcgagttctttgaggaggatctaggt
gagcatgtagtccacggggacactcttcctggccaagtgggcacagcttgcctcctctcc
tcctcttttctggagaacggcaaggacatcggagtagccacaattcccataatgggtcga
aattccaggcagaccatcgggaaagtcaaagtggactacctggtgatccggcccatccag
gggctgcaatttgacatgagctcctcattcaccaagtactggaagaaaagaagcaccctc
gatgtgggccacagaggagctggcagttcacatgcagccaagcaccacagaatcagggag
aacactatagcctctttcaaaagtgctgctaaacatggtgccgcctacgtggagtttgat
gttcacctctccaaagatgctgttcccattgtttaccatgatctgacatgctgcatagcc
accaaaaagaaaaaagacagtacttctctggaacttattgaggtgccagtcaaagacttg
acctttgatcagctgcagcttctaaagctggctcacgccactgcgattaaaggaaatgat
cacaaagatctgctggacgatgaagaagaaattgacgagtatcagccattcccctcactc
tcacagatcttccaagcgattcctgagcatgtgggcttcaacattgagctcaaatggatc
agccagatgaaggatgggtcatgggacggcaacctgccatcctacttcaacatgaacacc
tacctcgacaccatcctgtcctgtgttctgcagaaaggcggcaaaagacgcattgtcttc
tcctgtttcgacccggatatctgcaccatggtgcgtcaaaagcagaacaagtaccccatc
ctcttcctgacccagggaatttcagaaaagtatcctgaactaatggacatccgctgccag
acaactcagatcgccatgagctttgcccagagcgagaacattctgggaatcagtgcccac
actgaggaactgctaaagcaccttagctacattggagaggcccaggctaaaggtctggtg
gtgttcagctggggagaggacaacaacgaccatcagaacagaaagaagctgagggagcaa
ggaattgatgggctcatctatgatagtatctgtgatgaaaaaggagaacagccaaacatc
ttccaggtagaggagcatcactccatgcaggaggttattacagaggagaccctaaagagc
tccagctgttcctgctactccattccctgctccattgctccttgcaacgactccaagact
cgtactggcagtgctgagtccgattctggcctcagctcctcttaa
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