Scomber scombrus (Atlantic mackerel): 133997236
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Entry
133997236 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133997236
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133997236
NCBI-ProteinID:
XP_062292793
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Position
17:428406..440084
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AA seq
1023 aa
AA seq
DB search
MDEQGGKTVDSIPKEDLLRTLQNLGENDFKTFKWYLEQPEVLEDLPTIPKSRLEKADQLD
TVDLMVQTYSENTLQVTKKVLGKMTKQCSHTISKLLREVHSGKVPEILVMCQHKVKSNLK
EKFQNLFEKITKAGNSKLLQEFFTEIYILMQETGEVNMEHEIRQIETASRKPDRPETTIR
QEDIFKAPPGRDKPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELN
VLKEKKYSLVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEILTDVTE
STSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVGMVTEVRGFTDPQKEEYFRKR
FRDEEQASTIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKSREGGELPKTLTEMYIHF
LVLQAKVKNIKYDGKYERDPHWSPKSRKMIESLGKLAFDQLQKGNLIFYESDLTECGIDI
RAASVCSGVFTEVFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFINSGVNLLEEEQTT
SWWSEVFKDKPKLKHLYQSAVDEALKSPNGHLDLFLRFLLGLSLQTNQTLLRGLLTQTGS
SSQTNQKTVEHIKKQLSENVSAERNINLFHCLNELNDRSLVEEIQQSLRSGSLSTDKLSP
AQWSALVFILLSSEKDLDVFDLKKYSASEEALLRLLPVVKASNKALLSDCNLSERSCAAL
SSVLSSQSSSLRDLDLSNNNLQDSGVKMLSVGLGSPHCTLESLSMSGCLITEEGCASLAS
ALNFNPSHLRELDLSYNHPGDSGEKLLSAGLKDPHWRLDTLRVDHGGEHRLKPGVKKYFC
ELTLDTNTVNYYLKLSDNNRKVTHVKGRQSYSDHPDRFDYWPHLLCSNGLTGRCYWEVER
RGTVNISVSYRGINRRGKSYDSFFGWNDQSWRLFCSDVRYSVHHNKTRTSISSSSSSSSS
SSSSVSNRVAVYVDCPAGTLSFYRVSSDTLIHLHTFYTTFTEPLYPGFGFYPGSSVSLCP
LSE
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacagggaggaaaaacagtggactctatccctaaagaggatctcttgagaact
ttacagaatttgggagaaaatgactttaaaacatttaagtggtacctggagcagcctgag
gttctggaagacctcccaacaatcccaaagagtcgactggagaaggcggaccagttggac
acagtggatctgatggttcagacctacagtgaaaacactctgcaggtgaccaaaaaggtt
ctggggaagatgactaagcaatgctcacacaccatctctaaactactcagagaggttcac
agtggtaaggtgccagagattctagtcatgtgtcagcataaagtcaaatccaacctgaag
gagaaatttcaaaatttgtttgagaaaatcacaaaagcaggaaattccaaacttctacaa
gagttcttcaccgagatctacatactaatgcaagaaactggagaggtgaacatggaacat
gagatcagacagattgaaacagcatccaggaaaccagacagaccagaaacaacaatcaga
caagaagacatctttaaagccccacctggaagagataaaccaatcagaacagtgatgaca
aagggagtggctggcattgggaaaacagtcttaacacagaagttcactctggactgggct
gaagacaaagccaaccaggacatacacttcacatttccattcactttcagagagctgaat
gtgctgaaagagaaaaagtacagcttggtggaacttgttcatcacttctttactgagacc
aaagaagcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgacggtctg
gatgagtgtcgacttcctctggacttccacaacactgagatcctgactgatgttacagag
tcaacctcagtggatgtgctgctgacaaacctcatcagggggaaactgcttccctctgct
cgcctctggataaccacacgacctgcagcagccaatcagatccctcctgagtgtgttggc
atggtgacagaggtcagagggttcactgacccacagaaggaggagtacttcaggaagaga
ttcagagatgaggagcaggccagcaccatcatctcccacatcaagacctcacgaagcctc
cacatcatgtgccacatcccagtcttctgctggattactgctacagttctggaggatgtg
ttgaaaagcagagagggaggagagctgcccaagaccctgactgagatgtacatccacttc
ctggtgcttcaggctaaagtgaagaacatcaagtatgatggaaaatatgagagagatcca
cactggagtccaaagagcaggaagatgattgagtctctgggaaaactggcttttgatcag
ctgcagaaaggcaacctgatcttctatgaatcagacctgacagagtgtggcatcgatatc
agagcagcctcagtgtgttcaggagtgttcacagaggtctttaaagaggagagagggctg
taccaggacaaggtgttctgcttcgtccatctgagcgttcaggagtttctggctgctctt
catgtccatctgacattcatcaactctggagtcaatctgctggaagaagaacaaacaaca
tcctggtggtctgaagtctttaaagacaaacctaaactaaaacatctctaccagagtgct
gtggacgaggccttaaagagtccaaatggacacctggacttgttcctccgcttcctcctg
ggtctttcactgcagaccaatcagactctcctacgaggcctgctgacacagacaggaagt
agctcacagaccaatcagaaaacagtcgagcacatcaagaagcagctcagtgagaatgtg
tctgcagagagaaacatcaatctgttccactgtctgaatgaactgaatgatcgttctcta
gtggaggagatccaacagtccctgagatcaggaagtctctccacagataaactgtctcct
gctcagtggtcagctctggtcttcatcttactgtcatcagaaaaagatctggacgtgttt
gacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaa
gcctccaacaaagctctgttgagtgactgtaacctctcagagagaagctgtgcagctctg
tcctcagttctcagctcccagtcctctagtctgagagatctggacctgagtaacaacaac
ctgcaggattcaggagtgaagatgctgtctgttggactggggagtccacactgtacactg
gaatctctcagtatgtcaggatgtctgatcacagaggaaggctgtgcttctctggcctca
gctctgaacttcaacccctcccatctgagagagctggacctgagctacaatcatccagga
gactcaggagagaagcttttgtctgctggactgaaggatccacactggagactggacact
ctcagggtggaccatggtggagagcacaggttaaaacctggtgtgaagaagtatttctgt
gaactcacactggacacaaacacagtgaactattacctcaaactgtctgataacaacagg
aaggtgacacatgtgaaggggcgtcagtcatattctgatcatccagacagatttgactac
tggcctcatctgctgtgtagtaatggtctgactggtcgctgctactgggaggtcgagagg
agaggaacagttaatatatcagtgagttacagaggaatcaacaggagaggaaagagttat
gacagtttttttggatggaacgatcagtcctggagactgttctgctctgatgttcgttac
tccgtccatcacaataagacaagaacatccatctcctcctcctcctcctcctcttcctcc
tcctcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgctggcactctg
tccttctacagagtctcctctgacacactgatccacctccacaccttctacaccacattc
actgaacctctgtatcctgggtttgggttttatcctggttcctcagtgtctctgtgtcct
ctgtctgagtga
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