Scomber scombrus (Atlantic mackerel): 133997318
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Entry
133997318 CDS
T10651
Name
(RefSeq) homeobox protein MSH-C-like
KO
K09341
homeobox protein MSX
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133997318
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
133997318
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
133997318
NCBI-ProteinID:
XP_062292878
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Position
2:12653124..12654634
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AA seq
277 aa
AA seq
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MAPSPCIMMNPVQGSPSQDAKQLHQKEETDTEGEEVQPKDMTTEKGYKLQRSSLPFSVES
LISKKTTCRTSYSPSDLSLVLPKPVAGQGGQFSPRTFYAERKVSAESSQGVSSSSSEDSP
QFCEKDQSTWFQTPSFSTPPRNSSPTQCTLRKHKNNRKPRTPFTTSQLLALERKFRQKQY
LSIAERAEFSNSLNLTETQVKIWFQNRRAKAKRLQEAELEKFKLASKPVLPAFALPFPLG
AHMGSPTWGPSNAFPRPSLPVPGLFSGPVTYGMYYLS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggccccatccccttgtattatgatgaatcctgtgcaggggtcgccatcccaagacgcc
aaacagcttcatcaaaaagaggagacggatacggagggcgaggaagttcagcctaaagac
atgacgacggagaaaggatacaaacttcagcggagcagccttcccttcagcgtcgagtcg
ctgatttccaagaagaccacctgtcggacttcttattctccctcagatttatctctggtc
ctgccgaagcccgtggcagggcagggcgggcagttctctccaaggactttttacgcggag
aggaaggtttcggcggagagctcacagggtgtttccagtagttccagcgaggacagtccg
cagttttgtgagaaagatcagagcacttggttccagacgccttccttttctactcctcct
cgtaattcaagtccaactcagtgtactttaaggaaacacaaaaacaacaggaaacctcgc
acgcccttcactacctctcagctgctggcgctggagcgcaagtttcgccagaagcagtat
ctctccatcgccgagagagccgagttctccaactctctcaacctgacggagactcaggtc
aaaatttggttccaaaacaggagggcaaaagccaagagactgcaagaggccgagctggaa
aagtttaaactggcctcaaagcccgtcctgcccgcttttgcgctgccgtttcccctcgga
gcgcacatggggtctccaacatggggcccgtcaaacgccttcccgcggcccagtctgccg
gtacccggactgttcagtggacctgtcacttatggaatgtactatttgtcttag
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