Scomber scombrus (Atlantic mackerel): 133997348
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Entry
133997348 CDS
T10651
Symbol
ppp2r5cb
Name
(RefSeq) protein phosphatase 2, regulatory subunit B', gamma b isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03015
mRNA surveillance pathway
ssco04110
Cell cycle
ssco04114
Oocyte meiosis
ssco04261
Adrenergic signaling in cardiomyocytes
ssco04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133997348 (ppp2r5cb)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
133997348 (ppp2r5cb)
04114 Oocyte meiosis
133997348 (ppp2r5cb)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
133997348 (ppp2r5cb)
09158 Development and regeneration
04382 Cornified envelope formation
133997348 (ppp2r5cb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssco01009
]
133997348 (ppp2r5cb)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133997348 (ppp2r5cb)
03036 Chromosome and associated proteins [BR:
ssco03036
]
133997348 (ppp2r5cb)
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133997348 (ppp2r5cb)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133997348 (ppp2r5cb)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133997348 (ppp2r5cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
DUF5832
Motif
Other DBs
NCBI-GeneID:
133997348
NCBI-ProteinID:
XP_062292907
LinkDB
All DBs
Position
17:11396779..11423099
Genome browser
AA seq
578 aa
AA seq
DB search
MPNKTKKDKESPKSGKVGKSGGQENSEHEQGSNRKTSNSVPPTTQLLKGKQPGSQTPVKK
DKRQSSSRFSLSNNRELQKLPAFKDVPPAEQEKLFIQKLRQCCVLFDFVSDPLSDLKWKE
VKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRALPPSSNPTGAEFDPEEDEPTL
EAAWPHLQLVYEFFLRFLESPDFQPNVAKKYIDQKFVMQLLELFDSEDPRERDFLKTTLH
RIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFL
LKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPTVMALLKYWPKTHSPKEVMFLNE
LEEILDVIEPSEFVKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKIL
PIMFPALYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFRAEKSKEKAKWKERE
EAWIKIENLAKSNPQFLVYVDSIGSGSPMDMETDGPLLEDVNLLKKTVEEEATQIERNQR
RERPLMRRKSELPKDISTVTALELHRRAEEIMTTHDGH
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgccgaataaaacgaaaaaagacaaggagtcccctaagtctggtaaagttggcaagagt
ggagggcaggagaattcagagcatgagcagggctctaacaggaagactagcaacagtgtt
cctcctaccactcagctgctaaaggggaagcagccaggttcccagacacctgtcaaaaag
gacaagaggcagagctcctctcgcttcagcttgagcaacaacagggagctgcagaaactg
cctgccttcaaagatgttccccctgcagagcaggagaagctcttcatccagaagttgcgg
cagtgctgcgtactcttcgattttgtgtcggacccactgagcgacctgaaatggaaggag
gtgaaacgggcggcgctgagcgagatggtggagtacattacccacaacaggaatgtcatc
accgaacccatctacccagaggtggttcacatgtttgctgtgaatatgtttagggcgttg
ccgccatcatcaaaccccacgggtgctgagtttgacccagaggaagatgagcccacgcta
gaggctgcatggccacatctacagctcgtctatgaattcttcctacggttcttagagtcg
cctgactttcaaccaaacgtagccaaaaagtatattgaccagaagtttgtaatgcagctc
ctagaactgttcgacagtgaagacccaagggaaagagattttttaaagactactctgcat
cgcatatatggcaagttcctgggcctgcgagcatacattaggaaacagattaacaacata
ttttataggttcatttatgagactgaacatcataatggaatagctgaattactggaaata
ttaggcagtataatcaatggatttgcattaccattgaaagaagagcacaagattttcctg
ctgaaagttctgctgcctttacacaaagtcaaatctcttagcgtttatcacccacagctg
gcctactgtgtggtacagttcttagagaaggatagcaccctcacagaaccgacggtgatg
gctttgttaaagtactggccaaagacccacagtccaaaagaagttatgtttctcaatgaa
ctggaggagatcctggacgtcattgagccttcagagttcgtcaaagttatggagcccctc
ttcagacagctggccaaatgcgtgtccagcccacactttcaggtggcagagcgagctctg
tactactggaacaatgagtacatcatgagtctgatcagtgacaacgctgctaagatcctg
cccatcatgttcccagccctctaccgcaactccaagacccactggaacaagacgatccac
ggattgatctacaacgctctgaagctctttatggagatgaaccagaagctgtttgatgac
tgcacccaacagttcagggcagagaaaagcaaagagaaagccaaatggaaagagagagaa
gaggcatggatcaagattgagaatctagcaaagtcaaacccgcagtttctggtgtacgtc
gactcgataggctcaggcagtccgatggacatggagacggacgggccactgctagaagac
gtcaacttgctaaagaaaacagtagaggaggaggccacacagatcgagagaaatcagcgt
agagagcgcccattgatgcggaggaaatcggagctccccaaggacatctccactgtcaca
gctctggagttgcaccggagagccgaggaaattatgacaacgcacgacggtcactaa
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