Scomber scombrus (Atlantic mackerel): 133997431
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Entry
133997431 CDS
T10651
Symbol
gphnb
Name
(RefSeq) gephyrin b isoform X1
KO
K15376
gephyrin [EC:
2.10.1.1
2.7.7.75
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00790
Folate biosynthesis
ssco01100
Metabolic pathways
ssco01240
Biosynthesis of cofactors
Module
ssco_M00880
Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
133997431 (gphnb)
Enzymes [BR:
ssco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.75 molybdopterin adenylyltransferase
133997431 (gphnb)
2.10 Transferring molybdenum- or tungsten-containing groups
2.10.1 Molybdenumtransferases or tungstentransferases with sulfide groups as acceptors
2.10.1.1 molybdopterin molybdotransferase
133997431 (gphnb)
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Gene cluster
GFIT
Motif
Pfam:
MoCF_biosynth
MoeA_N
MoeA_C
Motif
Other DBs
NCBI-GeneID:
133997431
NCBI-ProteinID:
XP_062292988
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Position
17:complement(19326118..19417498)
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AA seq
736 aa
AA seq
DB search
MASDGMILTNHDHQIRVGVLTVSDSCFRNLAEDRSGVNLKDLVHDPSLLGGMIAAYKIVP
DEIDEIKETLVDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMSLAMLMGSL
NVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLRDAVVKVKEAA
DELEDLPSPPPPLSPPPNSSPRRQTEDKGVQCEEEDEEKKDSGVASTEDSSSSHITAASI
AAKIPDSIISRGVQVLPRDTASLSTTPSESPRAQATSRLSTASCPTPKVQSRCSSKENIL
RSSHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTAVLGTEIINYRDGMGRVLAQDVY
AKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTHTVMPGQVMRVTTGAPIPCG
ADAVVQVEDTELLRESEDGTEELEVRILVQARPGQDIRPIGHDIKRGECVLAKGTHMGPS
EIGLLATVGVTEVEVQKFPVVAVMSTGNELLNPEDDLHPGKIRDSNRSTLLATIQEHGYP
TINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVF
MKPGLPTTFATLDTDGARKLIFALPGNPVSAVVTCNLFVIPALRKMQGILDPRPTIIKAR
LSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQVSSRLMSMRSANGLLMLPPKTEQYV
ELHKGEVVDVMVIGRL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagacgggatgattttaacgaaccacgaccaccaaatccgggtcggagtcttg
acagtgagtgacagctgttttcgaaaccttgcagaggaccgtagtggcgtcaacctcaaa
gatctcgtccatgatccctctctgttgggaggtatgatcgcggcctacaagatagtgcca
gatgagattgacgaaatcaaggagactctggtggattggtgcgatgaaaaggaacttaac
ctcatcctaaccaccggaggcaccggcttcgccccgagagatgtcacgccagaggccact
aaggaggtgatagagcgtgaggctccagggatgtctctggcaatgctgatgggatccctc
aacgtcacaccgttaggcatgctttccagacctgtgtgtggtatccgagggaagacactc
atcattaacttaccaggaagcaagaaaggttcccaggaatgcttccagttcatcctgcca
gcgctgccgcacgccatcgacctcctccgggacgcagtggtgaaggtaaaggaggcggca
gacgagctggaggacctgccgtcgccaccgccgcccctctcgccgcctcccaacagttcg
ccacgccgccagaccgaggacaagggcgtgcagtgcgaggaggaggatgaagagaagaag
gacagcggcgtggcgtccaccgaggacagctcctcctcccacatcaccgccgcatccatc
gccgccaagatcccagactccattatctcgcggggtgtgcaggtgttgcccagggataca
gcctctctcagtaccacgccctcggagtcgccccgcgcccaggccacatcccgcctctcc
accgcttcctgtcccacacccaaagtgcagtcacgatgcagcagcaaagaaaatatccta
agatcaagtcacagtgctgtggacattaccaaggtggcccggaggcaccgcatgtccccc
ttccccctcacctccatggacaaggccttcatcactgtgctggagatgaccgccgtcctg
ggcactgagatcatcaactacagagatgggatgggtcgagtcctggctcaggacgtttat
gccaaagacaacttgccacccttccctgcttctgtcaaggatggttatgctgtgagagcg
gctgacggcccgggcgaccgcttcatcatcggagagtcccaagctggagagcagcccacc
cacacagtgatgcctggccaggtgatgagggtgacgacgggtgcccctataccctgcggg
gctgacgctgtagttcaggtggaagacaccgagctcctccgcgagtctgaagacggcaca
gaggagctggaggtacgaatcctagtacaggctcgcccagggcaggacatcaggcctatc
ggtcatgacatcaagcgtggggagtgtgtgctggccaaaggcacccacatgggcccctct
gagatcggtctccttgccaccgttggagtcacagaggtggaggtccagaaattccctgtg
gtggctgtcatgtctacaggaaatgagctgctgaacccagaagatgacctccatcctggg
aagatcagggacagcaatcgctccaccctgctggctactatccaggagcacggctaccct
actatcaatctgggcatcgtgggagacaaccccgatgaccttctcaacgctctgaatgaa
ggcatcagccgtgctgatgtcatcatcacctcaggaggagtgtccatgggagagaaggac
taccttaaacaggtgctggatattgatctacatgctcagatccattttggccgtgttttt
atgaaaccaggtctcccaacaacttttgccaccttggacactgacggtgctcgcaaactt
atctttgccctcccaggaaatcccgtgtccgctgttgtcacctgtaatctttttgtcatc
cctgccttgaggaagatgcagggcattttggaccctaggcccaccatcatcaaagcgagg
ttgtcttgcgatgtgaagttggaccctcgccctgaataccaccgctgcatcctgacatgg
catcaccaggagcctctgccgtgggcacagagcacagggaaccaggtgagcagcaggctg
atgagtatgcgcagtgctaacgggctcctgatgctacctcccaaaacagagcaatacgtg
gagctgcacaagggcgaggtggttgacgtcatggtcatcggccggctatga
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