KEGG   Scomber scombrus (Atlantic mackerel): 133997434
Entry
133997434         CDS       T10651                                 
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
  KO
K12893  serine/arginine-rich splicing factor 4/5/6
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040  Spliceosome
ssco05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133997434 (srsf5b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    133997434 (srsf5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssco03041]
    133997434 (srsf5b)
Spliceosome [BR:ssco03041]
 Common components
  Common spliceosomal components
   SR proteins
    133997434 (srsf5b)
SSDB
Motif
Pfam: RRM_1 RRM_3 Nup35_RRM_2 DUF5549 RRM_5 SET_assoc
Other DBs
NCBI-GeneID: 133997434
NCBI-ProteinID: XP_062292996
LinkDB
Position
17:complement(20861334..20867267)
AA seq 300 aa
MSGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGGGGGSGGGGGGRFSDRYGRGSQNSRSRNPPPMRTEN
RLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALEKLSGKE
INGRKIKLIEAAKKRSRSRSRSESSSRSRSRSRGRSPSRSPRRSRSPAKAHNRSRSRSGS
PGGGASSPPRSKSKEPTKRSSKTSKSATPPSPPAAQRASMSRSRSRSRSRSRSPSTDSQR
NT seq 903 nt   +upstreamnt  +downstreamnt
atgagtggttgtcgaattttcatcggccgactgagcccctcggcccgggagaaggacgta
gagaggttcttcaaaggatatggccgcatccgagacatcgacttaaagagaggcttcggg
tttgtggaatttgacgaccccagagacgctgaagatgctgtgtatgagcttgatggcaaa
gagctgtgcaatgaaagggtgaccatcgagcacgctcgtgttcgtctgcggggcggacgc
ggcagaggaggcggtggcggaggcagcggcggtggtggaggtggccgtttctctgatcgc
tatggcagaggctctcagaacagtcggagtcgaaaccctcctccgatgcgcactgagaac
cgcctgattgtggagaacttgtcgtctcgtgtcagttggcaggacctgaaagatttcatg
agacaagctggagaggtgactttcgcagacgcacatcgacccaagctcaacgaaggggtt
gttgagtttgcctcttacagcgatctgaaaaacgcccttgagaaattgtctggaaaggaa
atcaatggcaggaaaatcaagctcatcgaggcagctaagaagaggtcaagaagtcgttcc
cggtccgaaagctcttctcgctcgcgctctcgttcccgcggccgctccccatcgcgttcc
cccagacgctcccgcagcccagcgaaggctcacaaccgctcccgctctcgcagcggctcc
cccggtggcggcgcctcctcccccccgagaagcaaatccaaggagcccaccaaacgctcc
tccaagaccagcaagtcggccacgccgccctcccccccggctgcccagagagcctccatg
tcccgttcccgctcccgttcccgctcgcgctctcgttccccttctaccgacagccagcgc
taa

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