Scomber scombrus (Atlantic mackerel): 133997434
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Entry
133997434 CDS
T10651
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040
Spliceosome
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133997434 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133997434 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133997434 (srsf5b)
Spliceosome [BR:
ssco03041
]
Common components
Common spliceosomal components
SR proteins
133997434 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
C19orf84
RRM_5
SET_assoc
DUF7376
Motif
Other DBs
NCBI-GeneID:
133997434
NCBI-ProteinID:
XP_062292996
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All DBs
Position
17:complement(20861334..20867267)
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AA seq
300 aa
AA seq
DB search
MSGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGGGGGSGGGGGGRFSDRYGRGSQNSRSRNPPPMRTEN
RLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALEKLSGKE
INGRKIKLIEAAKKRSRSRSRSESSSRSRSRSRGRSPSRSPRRSRSPAKAHNRSRSRSGS
PGGGASSPPRSKSKEPTKRSSKTSKSATPPSPPAAQRASMSRSRSRSRSRSRSPSTDSQR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttgtcgaattttcatcggccgactgagcccctcggcccgggagaaggacgta
gagaggttcttcaaaggatatggccgcatccgagacatcgacttaaagagaggcttcggg
tttgtggaatttgacgaccccagagacgctgaagatgctgtgtatgagcttgatggcaaa
gagctgtgcaatgaaagggtgaccatcgagcacgctcgtgttcgtctgcggggcggacgc
ggcagaggaggcggtggcggaggcagcggcggtggtggaggtggccgtttctctgatcgc
tatggcagaggctctcagaacagtcggagtcgaaaccctcctccgatgcgcactgagaac
cgcctgattgtggagaacttgtcgtctcgtgtcagttggcaggacctgaaagatttcatg
agacaagctggagaggtgactttcgcagacgcacatcgacccaagctcaacgaaggggtt
gttgagtttgcctcttacagcgatctgaaaaacgcccttgagaaattgtctggaaaggaa
atcaatggcaggaaaatcaagctcatcgaggcagctaagaagaggtcaagaagtcgttcc
cggtccgaaagctcttctcgctcgcgctctcgttcccgcggccgctccccatcgcgttcc
cccagacgctcccgcagcccagcgaaggctcacaaccgctcccgctctcgcagcggctcc
cccggtggcggcgcctcctcccccccgagaagcaaatccaaggagcccaccaaacgctcc
tccaagaccagcaagtcggccacgccgccctcccccccggctgcccagagagcctccatg
tcccgttcccgctcccgttcccgctcgcgctctcgttccccttctaccgacagccagcgc
taa
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