Scomber scombrus (Atlantic mackerel): 133997477
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Entry
133997477 CDS
T10651
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
Other domain-containing proteins
Patched domain-containing proteins
133997477 (ptchd4)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133997477
NCBI-ProteinID:
XP_062293056
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Position
17:complement(27933819..27971486)
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AA seq
865 aa
AA seq
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MCFLGGDGASASWILWRMLRQVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPETDLEVLVAPTHSLAKIERSLANSLFPIDQSKHKLYSDLHTPGRYGRLILLAKS
GGNILELADQVLQVHKHVLDLHDGRVSFIGHQLGGVSFSPNSRDQQVKFARAVQITYYLR
NHGPVVQDAIAERWENEFCALVSRLSTVEATHAPDQLHIQSLTSFSLWRDFHQTGVLAKG
EVLVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLL
GIPFFAMGHGTKGVFELLAGWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGA
SPFTNIESVKIFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYL
DRQPTWFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYA
SFSFMGCLQISDGSNIVNLLASNSPSVSYAMTQQKYFSNYSPVIGFYIYEPIEYWNSTVQ
EHLKTLSHGFNKISWMDNFFHYLRVVNVSASTKTDFITILKGSFLRSPEYQHFTEDIIFS
KNRETDEYDIIASRMYLVARTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRY
SSSVISPILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSI
SILCLIYTLNFAMDHCVPHLYTFVLANEHTRTQCIKLALEEHGAAILQNTSCFVIGMMPL
VFVPSNLTYTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKERERERE
REREREREEIECIEVRENPDHVTNV
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcttaggaggagacggggcatctgcaagctggattttgtggagaatgctgcgg
caagtgatacacagagggctcaaggcttcgttttattggctgggcttattcgttagcagg
caccccgttttcttcctcactgtccccgcggtcctcaccatcattttcggatctactgtg
ctcagccgattcaagccggagacggacctggaggtgctggtcgccccgactcacagcctc
gccaagatcgagaggagtctcgctaacagcctgtttcccatcgaccagtcgaagcacaag
ctgtactcggatttgcacaccccgggcagatatggcaggctgatcctgctggccaagtcc
ggggggaacatcctggagctggccgaccaggtcctgcaggtccacaagcatgtgttggat
ttgcacgacggccgtgtgtccttcatcggccaccagctgggtggcgtgtccttctcaccc
aacagccgtgaccagcaggtcaagttcgcccgcgctgtccagatcacctactacctccgt
aaccatgggccagtggtgcaggatgccatcgccgaacgctgggagaatgaattctgcgcc
ctggtcagccggctgtccacagtcgaggcaactcatgcgcctgaccagctgcacatccag
tcgctcacttccttcagtctgtggcgggacttccaccagacaggcgtgctggccaagggg
gaggtgctggtcagcctggtgctggtgctcctggccgccaccatctccagctccatgcga
gactgcctgagggggaagccgttcctgggcctcctgggcgtgctgaccatatgcatcgct
aacgtgacagctgcagggatctttttcatatcggacgggaagttcaactccacgctgctg
gggatcccgttctttgccatgggccatggaaccaaaggggtgttcgagctgctggcaggc
tggaggagaacaagggaaaacttaccctttaaagagcgtgtggcagatgcttttgctgat
gtgatggtgtgctacaccatgaccagctcactctacatcatcacatttggtatgggagct
agtcctttcaccaacattgagtcagtgaagattttctgccagagcatgtgtgtcgcaatc
ctggtcaactacttttacgttttctcgttctatggctcctgtctggtgtttgctggacaa
ctggagcagaaccgctaccacagtgttttctgttgtaaaatcccctcggtggaatacttg
gaccgccagcccacatggtttaaaaccatgatgagtgatggccatgacttgtccacacac
cacgacagtgtcccctaccagaatcacttcatccagcacttcctgcgtgagcactacaca
gaatggattaccaacacctatgtcaaaccctttgtggtcattctgtatcttatctatgcc
tctttttcattcatgggatgtttacaaatcagtgatggatcaaacattgtgaacctgctg
gctagtaactctccaagtgtttcgtatgctatgacccagcagaaatacttcagcaactac
agtcctgtgattggattttacatttacgagcccattgagtactggaactccacagtgcag
gagcacctaaagactctgagccatggcttcaacaagatctcctggatggacaactttttc
cactacctacgggtggtgaatgtgagtgcatcaaccaagaccgacttcatcaccatcctc
aagggctccttcctgcgcagcccagagtaccagcacttcactgaggacatcatattctcc
aagaaccgtgagactgatgaatatgacattatcgcctcacgcatgtatttggtggcacgg
accacagagaagaaacgtgaggaggtggtggagcttcttgagaaacttcgtccattgatg
ctgataaacagcatcaagttcattgccttcaatcccacatttgtgtttatggaccgctac
agctcctccgtcatctcgcccatccttacctcaggcttcagcgtactcaccatcctcatc
ctcactttcttcctggtcatcaaccccttggggaacttctggctcatcctcacagttacg
tccgtggagctgggtgtcttgggtttgatgaccctctggaacgttggcatggacagcatc
tcaatcctgtgccttatttataccctcaacttcgccatggatcactgtgtaccacacctg
tatacttttgtgctggccaacgagcacactaggacgcagtgcatcaagttggcactggag
gagcacggggcagccatcctgcagaacacatcctgctttgtgattgggatgatgcccctg
gtgtttgtgccttccaatctgacctacacactgtttaagtgctccctcctcactgcgggc
tgcaccgtgctgcactgcttcgtcatcctccccgtcttcctaacctttttcccgccgtcc
aaaaagagacacaagaaaaagaaacgggccaagcggaaagagcgggaaagggaacgggaa
agggagagggaaagagaaagggaggagatagagtgcatcgaagtcagggagaatcctgat
catgtgacaaatgtctga
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