Scomber scombrus (Atlantic mackerel): 133997480
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Entry
133997480 CDS
T10651
Symbol
slc5a6a
Name
(RefSeq) solute carrier family 5 member 6a
KO
K14386
solute carrier family 5 (sodium-dependent multivitamin transporter), member 6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
133997480 (slc5a6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
133997480 (slc5a6a)
Transporters [BR:
ssco02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
133997480 (slc5a6a)
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GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
133997480
NCBI-ProteinID:
XP_062293060
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Position
17:27134829..27146039
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AA seq
643 aa
AA seq
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MGEVVQMHFTTVDYVIFVLLLVASAGIGLFYAFSGGRQRTTQEFLMADRSMSCLPVSLSL
LATFQSAVAILGAPSEVYTFGTQYWFLGCSYFLGLLIPAHVFIPVFYRLRLSSAYEYLEL
RFNKTVRICGTVTFIFQMVIYMGVVLYAPALALNAVTGFDLWGGVLAMGLVCTLYTAMGG
LKAVMWTDVFQTVVMFAGQLAVIVVGASQAGGMAEVWRKANNGSRIARLDLNPDPLERHT
FWTLGVGGVFLMLALYGVNQAQVQRYLSSRTEKAAVMSCYVVFPCQQIVLCMGCLMGLVM
FARYGEDSPLDKGYVQTNDQMVLYFVMDVFQDLPGLPGLFVACLFSGALSTISSAFNSLA
TVTMEDLIKPHFPNMTESKATLLSKALALAYGLICLAMAYLASLMGSVLQAAFSIFGMVG
GPLLGLFCLGMFFPWANSIGAVVGLVAGLAMAFWIGIGSFMMRLPGPTPVPPINSTMSPL
FDNMTTAAMTTLVTAATAKPRPTGVEALYSLSYMWYSAHNSTTVVVVGLLVSLITGPMKE
KDLAPGTVFPVLGTLLFFLPERYREKLCCVTPLPSKPKEINTQPYKMAKKDGNGAAYCKE
DTVTEDKEAASDKAQTDQEDEAETRVNQPSCQLTAHTVQETAL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgggggaggtagtccagatgcacttcaccacggtggactacgtcatcttcgtcttgctg
ctggtggcctctgccggcatcggcctgttctatgccttctctggaggccgccagcgcaca
acacaggagttcctgatggctgaccgttctatgagctgcctgcctgtgtctctgtccctg
ctggccactttccagtcggctgtggccatcctaggcgctccgtcggaggtgtacaccttt
gggacgcaatactggttcctgggttgctcctacttcttgggcctgctcatcccagctcat
gtcttcataccagtcttctacaggctgcggctgtccagcgcctacgagtatctggagctg
cgctttaacaagactgttcgcatatgtgggactgtgaccttcatctttcagatggtcatt
tatatgggggtggtcctgtatgctccagccttggcactcaatgcagtgactggttttgac
ctgtgggggggagtgctagccatgggattggtgtgcactctgtatactgctatggggggc
ctgaaggcggtgatgtggaccgacgtgttccagacggtggtaatgttcgcaggccagttg
gcggtcattgtggtgggggcaagtcaggcagggggcatggcggaggtctggaggaaagcg
aacaacggcagccgcattgctagattagacctgaaccccgaccctctggagcgccacacc
ttctggactctcggggtgggtggagtcttcctgatgctggctctgtatggggtcaaccag
gcccaggtccagagatacctcagctcacgcacggagaaagcggccgtcatgtcctgctac
gttgttttcccatgccagcagatcgtcctgtgtatgggttgtctgatgggtctggtcatg
tttgctcgctacggagaggacagccctctggacaaaggctacgtccaaaccaatgatcag
atggtgctgtacttcgtgatggatgtattccaagatctgcccgggctgccaggcctgttt
gtggcctgtctcttcagtggagctctcagcactatctcatctgccttcaactccttagca
acagtaactatggaggacctgattaaaccccattttccaaacatgactgagtctaaagcc
acactgctgtccaaggcactggctttggcttatgggctaatatgtctggctatggcctac
ctcgcctccttaatgggatctgtgctgcaggcagccttcagtatctttgggatggtgggt
ggtcctctgctgggcctcttctgtctgggaatgttcttcccctgggcaaactccattggt
gcagtggtgggactagtagcaggcctcgccatggccttctggatcggcattggcagtttc
atgatgcgcctgcctggtccaaccccagtgccccccatcaacagcaccatgtcacctctg
tttgacaacatgaccacggccgccatgactacactggtcactgctgccacagccaagccg
aggccaacaggagtggaggcgctctattcattgtcctacatgtggtacagtgctcacaac
tccaccactgtggtggtggtgggactgctggtcagcctgataacaggacctatgaaggag
aaggatctggcccccggcactgtgttcccagtcctgggcacactgcttttctttctgccc
gagcgctacagagagaagctgtgctgtgtcactcctctgccttccaagcccaaagaaatc
aacacgcagccttataagatggccaagaaggacggaaacggagcagcttactgcaaagag
gacaccgtcaccgaggacaaagaggcggcaagcgacaaagcacaaaccgatcaggaggac
gaagcagaaacgagggtcaatcagccatcgtgccagctgacagctcacactgttcaggaa
acagccttgtga
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