Scomber scombrus (Atlantic mackerel): 133997492
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Entry
133997492 CDS
T10651
Symbol
nhsl1b
Name
(RefSeq) NHS-like protein 1 isoform X1
KO
K24144
Nance-Horan syndrome protein and NHS-like proteins
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133997492 (nhsl1b)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
133997492 (nhsl1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHS
Motif
Other DBs
NCBI-GeneID:
133997492
NCBI-ProteinID:
XP_062293075
LinkDB
All DBs
Position
17:15503260..15609970
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AA seq
1687 aa
AA seq
DB search
MPFHQRSIEPRRVSRLSARDGDETGRRKLRRPVLFSSVDEVSCHTLTSIIYQLSDLSRHA
SDIFLGIEVQAGMVFRRSCRIQGRLHILQGEVHKLDPKKVQIPVSNLDEESKWTVHYTAP
WHQQENVFLPGSRPPCVEDLHRQAKVNLKTALRECDKLRKDGFRSSQYYSQGPTFCDPLQ
SSSSLQEEEDDDNDKKSTASSVDDDKSQLSMRPQTPQGGGKEGEVSEVDGQLVWTKTVPL
PTPEEKMRQTAKAVPTDIVAINVTGAVFDRQASVRRSLINTDTVSRRPKKVKRRKTISGL
PDNFNQELAAKGRSGELRPQSMFIPGQYSTLGRVGSVNSTLRRSQTRDSGCQTEEVKIVP
PSMRRIRAQRGQGIAAQMAGISASSSTGSISISSSDSSGILMLPHHFNGDPSRFHSLPRQ
GARVSLSADPIYSSTPIKSEEQTTPHRQIGKLQVDNTVVHMRNAPRTSTLPRPKSQEVRG
TQSSEWGGGPACVVSPHAAYATSLIPNATMSSSSEVITLNTSSQLSNSPVSAYPAARPLS
VASSTNTDPLNSSPTPFSHSTTCPAMATSTPTHTPQDGRLNAGGPASESGHSDSSGHSHR
TLAPTPPSCVTEEQWIYDTPENVAVQHRTLTSSCSTPINQLYSSLELSSRTTTDSSSVYS
QDNDGYYTSMHMDSGLRSRSHGSGHGAAAGRAARHSMYECREMANQEDSGSLYSDRSLSR
SISLRKSKKPPLPPARTDSLKRKPGAKKPLGCVSAISGVNGPNGAMLNETLIASLQQSLQ
MGLRGGKGCGSPSSPSHSPSSDYDDPWVLRPRSQSSVSAGSSAASLVANANGGGVSNVYS
LCHVTPAHSDTSSLRSDYADSWGYYMDYPRNHGDQRPQTPLAHATDNMSAGPHPGELQNG
GEIHGNSQGHGAPGQEGGLAVKPKTSTSSPDRVHRLTSPSSGYSSQSNTPTAGTPVPSLI
RSMSPSGSRPKPKVPERKSSLLSSVSMSSSSTSLSSNTSDSIKSSGPPPPPPPPLPPLPL
SSSSAPNTPLSPPPPFPPPLPPNSGSPTPPPAPLLPNTPHGPTLSPPPACSTSPEFPPPP
SPETLIHTSLSFNGSFSPPPPPPPPVPTTGPPPPPPLPAFIPPSSSPSPMKAVKDALKPA
VPNSPTKSSKPLITPFALQSVQLRSVKRPEKEINGKTDHTKAEEPGVDLIKGLMPQTLGK
SDSQEHPTILTPLNFSPEEDSRNSSPSPVSKLLEELSLDCSITDDTPDCAVYNGITDDES
CILLNGKEKEALQTPPQSSQSSPVKQKPPAVSKKPLFFLPPVSPQPTIKEQFLSQHEDTN
SLSRTEDQIDAPQIQVKDEEKERKSEQQEVEKDEETLAESSVSSTEIQEESYILASVSLD
ASLDHELRTNGDDHEEEEEDGDGTSSTTGSISSREDDTGEVFDSSTAESSSAPSANGASQ
KIMVTPTPTRTRTTEDLFAAIHRSKRKVLGRRESDEEKSRAGSQSQSPPITPITPTPPTS
VTPSPVSSLPRQTGSIQRNLRKSSTSSDTFKALLLKKGSRTETSFRMSATEMLRTTDPRS
QRTRSDSALDYPAASASSPTSPHSPCASPGRGKRAADEWSRCEALALSSPTSSSFSMSGF
KYGRSRTPPSAASSKYNARSRILSSPMTVICEREGEMAESEYGDTADSQTLPVLQDSYGT
LSEESRS
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgccctttcatcagaggagcatcgaaccgcggcgtgttagcaggttatcggcgagggat
ggggacgagaccgggagacgcaaactgcggagacccgttttattctcgtctgtggatgag
gtcagctgtcacacgctcaccagcataatctaccaactttccgacctttctcgacatgcc
agcgacatcttcctgggcatcgaggtgcaggcagggatggtgttcaggagatcctgcagg
attcaggggcggctacacattctgcaaggagaagtccacaagttagaccccaagaaagtc
caaatcccggtgtctaacctggatgaggagagcaagtggacggtgcactacacagctccg
tggcaccagcaggagaacgtcttcttaccaggcagcaggccgccctgcgtagaagacctg
caccgccaagccaaagtcaacctcaagaccgccctgcgagaatgtgacaagttgaggaaa
gatggttttcggagctcccagtactactctcagggtcccaccttttgtgacccactacag
tcttccagcagcctgcaggaagaggaggatgatgacaatgataagaagtcaacagcttca
tcagtggatgatgacaaatctcagctgtccatgaggccccagaccccacagggaggcggc
aaagaaggggaagtgtcagaggttgacggacagttggtatggaccaaaaccgtgcccctc
cccacaccagaggagaagatgaggcagactgccaaggccgtgcccacagacatagttgcc
atcaacgtcacaggggcagtgtttgaccgacaagcgagtgtccggcgctccctcattaac
actgacaccgtgtcccgccggcccaagaaggtcaaacgcagaaagactatatcagggctg
cctgacaacttcaaccaagagctagcagcaaaaggacgcagcggagagctccggccacaa
tccatgttcatcccgggacagtattccactttgggccgagtcggaagtgtcaactcaacg
ctccgacgttcccagacccgagactcaggctgccagacagaagaagtgaagattgtaccc
ccgtctatgagaagaattcgggctcagagaggacaggggatcgctgctcagatggccggc
atttctgcttcctcctctacaggaagcatatccatctccagtagtgacagttctggaatc
ttgatgctaccacatcattttaacggagacccttcccgttttcacagtctaccccgacag
ggcgccagggtgtctctcagtgctgatcccatctacagcagcacccccattaagtcagag
gaacaaactacaccacataggcagattggaaagcttcaggttgacaatacagtggtgcac
atgaggaatgccccaaggacaagcaccctgcccaggcccaagtctcaggaggtgaggggg
acacagtccagtgagtggggtggtgggccagcttgtgtggtctccccacatgctgcttat
gccacctcactcatccccaatgccaccatgtctagctcttctgaggtcatcaccctaaac
acctccagtcagctctccaactctccggtctcagcttaccccgcagctcgaccgctcagt
gtagcttcctccaccaacactgaccccctgaactccagtcccacacccttcagccacagc
accacctgtccagccatggccacatccacccctactcacacaccacaggacggtcgtctg
aatgcgggaggacctgccagcgagtcagggcactcagacagcagcgggcacagtcacaga
accttggcccccacaccgccatcctgtgtgacagaagagcagtggatctacgacacacca
gaaaacgtggctgtccagcaccgcactctgacctccagctgttccactcctataaaccag
ctgtacagcagcctggagctgtcctccaggaccactactgactccagctccgtctattcc
caggacaatgacggatattacacctccatgcacatggactcaggccttcgctcacgcagc
catggcagtgggcacggggcagcagctggacgggcggccagacacagcatgtacgagtgc
cgtgagatggccaatcaggaagactctggaagcttgtacagtgaccgctctctgtcccgc
agcatctccctccgcaagtccaagaagcctccgctgcccccagcccgtacagactctctc
aaacgcaagcctggtgcaaaaaagccccttggatgtgttagcgccatcagcggtgttaat
gggccaaacggagctatgcttaatgagactcttattgctagcttgcagcagagcctacaa
atgggactcagaggagggaaaggatgcggctctccttcttccccctcccacagccccagc
agtgactatgatgacccttgggtgctacggccacgaagtcagagtagcgttagtgcaggt
agctctgcagcatctctagtagctaacgcaaacggtggcggtgtgtctaatgtatactca
ctatgccacgtgacgcctgctcacagtgacaccagcagcttgcgttccgactatgccgat
tcctggggatactatatggactaccctcgtaaccatggagaccagaggccacagactccc
ctggcccatgccacagataacatgtcagccgggcctcacccaggagaactacagaacgga
ggtgagattcacggcaacagccagggccatggagctccaggccaggagggtgggttggca
gtgaaacccaaaacatccacctcttcccctgacagggtgcacagactgacttccccatct
agtggctactccagccagtccaacaccccaacagctggaaccccagtgccctcgctcatc
aggtccatgtctccctcaggcagccggcccaagcctaaagtacctgagaggaagtcctct
ctcctttcctctgtttccatgtcttcctcttccacttccctttcttccaacacctctgac
tcaattaagagttctgggcctcctccgccaccacctccaccccttccaccccttcccctt
tcctcatcctcagctccaaacacccctctcagcccacctccacccttccctccccctcta
cctccaaattcaggttcccccactcctccgccagctccactattaccaaacactccacat
ggtccaactctgagcccaccacctgcttgctccacctccccagaattccctcctcctcca
tcccctgaaaccctaatccacaccagtttgtctttcaatgggagcttcagtcctccccct
ccgcctccccctcctgttcccaccacggggccccctccacctcctccattgcctgctttt
atcccaccttcttcctccccatctcctatgaaagcagtgaaggatgctcttaaacctgct
gttcccaacagccccacaaagtcatctaagcccctcatcactccctttgcgctgcagagt
gttcagctccgctcagtcaagcggccagaaaaggagatcaatggcaaaacggaccacacc
aaagctgaggaaccaggggtggacctcatcaagggtctaatgccccagaccctggggaag
tctgattcccaagagcatcccaccatattaaccccattgaatttctctccagaagaagat
tcacgtaattcctcaccatcacctgtatcaaagctcctagaagagttgtcattagactgc
agtatcacggacgacacaccagactgtgctgtctacaatggaataactgatgatgagagt
tgcattcttttaaatgggaaagaaaaagaagcattgcagactccaccacagagttcccaa
agttcccctgtcaaacagaagcccccagcagtctccaagaaacctctcttctttctccca
cctgttagcccccaaccaacaatcaaagaacagtttctatctcagcatgaagatacaaac
agcctgtccagaacagaagatcaaatagatgcaccacaaatccaagtgaaggatgaagag
aaagagaggaaaagtgagcaacaggaggtggagaaggatgaggaaactttagcagagagc
agtgtatcatccacagaaatccaggaggagtcctacatccttgcctctgtcagcctggac
gcaagccttgaccacgagctgcgtacaaatggagatgatcatgaagaggaagaagaggac
ggagatggaacaagtagcacgactgggtccatcagctccagggaggacgacacaggtgag
gtgttcgactccagtacggctgaatcgtcttcggccccatctgccaacggggcctcacag
aagatcatggtgaccccgactcccacacggacccgaaccactgaggacctctttgccgcc
attcacaggtccaaacgcaaggtcctgggtcgcagggagtctgatgaggaaaagtcccgt
gctggaagccagtcacagtctccacccatcacccccatcacccccaccccccccacaagc
gtgaccccaagcccggtgtcctcactgcctcgtcagacaggctccatccagcgcaacctg
cggaagtcctccaccagcagtgacaccttcaaggctcttctccttaaaaagggcagccgc
actgagaccagcttcaggatgtctgccactgagatgcttcgcaccactgatcctcgctcc
cagaggacacgctccgactcagctttagactaccctgctgcttcggcctcctcaccaacg
tcgccacacagcccctgcgcctcccctggccgtggcaagagggcagcagatgagtggagc
cgctgcgaggccttggctctgtcctcaccgacgtcatcatccttctcaatgagcgggttc
aagtacggacgttcacgcacgccgccctctgctgccagcagcaagtataacgcacgcagc
cgaatcctcagcagcccaatgacagttatctgtgagcgcgagggcgagatggctgagagc
gagtacggagacactgcagacagccagactctccctgtgctccaggactcttatggcact
ttatctgaagagagcagaagttaa
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