Scomber scombrus (Atlantic mackerel): 133997493
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Entry
133997493 CDS
T10651
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03410
Base excision repair
ssco04210
Apoptosis
ssco04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133997493 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
133997493 (parp1)
04217 Necroptosis
133997493 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssco03032
]
133997493 (parp1)
03036 Chromosome and associated proteins [BR:
ssco03036
]
133997493 (parp1)
03400 DNA repair and recombination proteins [BR:
ssco03400
]
133997493 (parp1)
Enzymes [BR:
ssco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
133997493 (parp1)
DNA replication proteins [BR:
ssco03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
133997493 (parp1)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
133997493 (parp1)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
133997493 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
133997493
NCBI-ProteinID:
XP_062293077
LinkDB
All DBs
Position
17:15465254..15477117
Genome browser
AA seq
1014 aa
AA seq
DB search
MAESQEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWQ
RAAAQSTGDIAGYSDLRWDDQEKVKKAIESGGVAGGKGDQKSGAKGEKTLNDFAVEYAKS
NRSTCKGCEQKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTACFVSRREELAFKPEYSAAQ
LKGFNALRAEDKEEMKKRLPAVKSEGKRKADVVDGASKKHKKEEAEEKTKLEEQLKNQSQ
LIWGIKDKLKKYCSTNDMKELLIANGQEVPSGESNVLDCLADGMAFGAIEACKECTGQLV
FKGDAYYCKGDISAWTKCVFKTATPLRKDWVTPKEFHMVPFLKKFKFKRQDRLYPKEAPT
QTLTAAKAEPLASASSAPTKPLPEGAPSDKPLTGMKLLTVGKLTKNKDDLKVAVEELGGK
ITGTASKASLCLSTKKEVEKMSKKMEEVRDAGVRVVSEDFLTDIKSSGKALQELVSLHAI
SPWGAEVKVEAQAPSAASKSGALATKSTGKVKEEEGGSKSKKMKLTVKGGAAVDPDSGLE
NSAHVLEQGGKMYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGNK
LDKFHDKNSALDNFLVVYKEKTGNSWGASNFTKYPNKFYPLEIDYGQDEEAVKRLTASAG
TKSKLAKPVQELIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLTDVQQAV
SNNVPEAQILDLSNRFYTLIPHDFGMKKPPLLNTLDYIQAKVQMLDNLLDIEVAYSLLRG
GAQDNESDPIDINYDKLKTKIEVVDKATDEAEILTQYVKNTHAATHNTYTLEVQEVFKIV
REGEHQRYRPFEELHNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADM
VSKSANYCHTSQSDSVGLLLLAEVALGNMHELKKASHITKLPKGKHSVKGLGRTAPDPGA
SVNLNGVQVPLGKGVNTNIDDTSLLYNEYIVYDVAQINMKYLMKVKFNYQTSLW
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtctcaggaggacaagctgtacaaagctgaatacgccaaaagtggccgtgcg
tcgtgcaagaagtgcaaagaaaacatcgctaaagactcgttgaggatggccatcatggtg
cagtcacccatgtttgatgggaaagtcccccactggcaccacttttcctgcttctggcag
agagcggcagctcagtctactggtgacatcgctggctattctgacctccgctgggatgac
caagaaaaggtcaaaaaggccattgaaagtggtggagttgctggagggaaaggtgaccag
aagagtggagctaaaggagagaagacactgaacgactttgctgtggaatacgccaagtcg
aatcgcagcacgtgcaaaggctgtgagcagaaaatagaaaaagatcagattcgtgtatct
aagaaaactgtggacccagagaagccccagttgggcctgatcgaccgctggtaccacaca
gcgtgtttcgtgagccgcagggaggagctggccttcaagcctgaatacagtgcagctcag
ctgaagggtttcaacgcgctacgagcagaagacaaagaagagatgaagaagaggctccct
gctgtcaaatctgaagggaagcgtaaagctgatgtggtggacggagcttcaaagaaacat
aagaaggaggaagctgaagagaagacaaagctggaagagcagttgaagaaccaaagccag
ttgatttggggaatcaaagacaagctgaagaaatactgttcaaccaacgatatgaaggag
ctgcttattgcaaatggccaggaggttccctctggagagtccaacgtgctcgactgcttg
gccgacggcatggcctttggtgctattgaggcctgcaaggagtgcacgggccagctggtg
ttcaagggtgatgcctattactgtaaaggggacatctcagcttggacaaagtgtgtgttc
aaaactgcaacacccttacgcaaagactgggtcacccccaaggaatttcatatggttcca
ttcctgaaaaaattcaaattcaagcgacaggacaggttgtaccccaaggaggctcccacc
caaaccttgaccgcagccaaagccgaacccctggcgagtgcatccagtgccccaactaag
ccactgccagaaggagcaccttcagacaagcctcttactggtatgaaactgttaactgtg
ggcaaactcaccaagaataaggatgatctaaaggttgctgtggaggagctgggtggaaag
attaccggtactgccagtaaagcctctctctgcctcagcaccaagaaggaagtggagaag
atgagtaagaagatggaggaagtgagggacgctggcgtgcgtgtggtctctgaagatttc
ctcacagacattaagtcgtcgggtaaagcgctccaggaactggtttccctgcacgctatc
tcaccctggggggcagaggtcaaagtcgaggctcaggctccatctgcagcctccaagtct
ggagcgctggctaccaagagcacaggcaaggtgaaggaggaggaaggtggtagcaaatcc
aagaagatgaaactcacagtcaaaggaggagctgctgttgatccagattcaggtctggag
aacagcgctcacgtcctggagcagggtgggaaaatgtacagcgctacactgggccttgtg
gacatcgtcagaggaactaactcctattataaactgcagttactggaggatgacgtacag
aaaaggtactgggtgttcaggtcatggggcagagtaggcacaaccattggaggcaacaag
ctggacaaatttcacgacaagaactcagcgctagacaacttcctggttgtgtacaaggag
aagacagggaacagctggggcgcctccaacttcaccaaatatcccaataagttctaccca
ctggagatcgactacggacaggatgaggaagcggtgaagaggctgactgccagtgctggc
accaagtctaaacttgccaaacctgttcaggaactgatcaagatgatctttgatgtggag
agcatgaagaaggccatggtggagtttgagatcgacctccaaaagatgccacttggaaag
ctgagtaagaggcagattcagagtgcatacgctctcctcactgacgtacagcaggctgtg
tcaaataatgtgcctgaggcccagatactggatctatccaatcgcttttacaccctgata
cctcacgactttgggatgaagaaaccgccactgctcaacaccctggactacattcaagct
aaagttcagatgttggacaacctgttggatattgaagtggcatacagcctgctgagagga
ggcgcccaggacaacgagagcgatcccattgacataaactatgataaactcaaaacaaag
attgaggttgttgacaaggccacagatgaggctgagatccttacgcaatatgttaaaaac
acccatgctgctacacacaacacttacacactggaagtgcaagaagtcttcaaaattgtt
cgagagggagagcaccaacggtaccgtcccttcgaagaactacacaatcgccagctactg
tggcacggctcacgcaccaccaactacgctggtatcttgtctcagggtcttcgcattgct
ccaccagaggccccagtgactggttacatgtttggtaaaggtgtgtactttgctgacatg
gtgtccaagagtgcaaactactgtcacacctcccagtcagactctgttggtctcctgctg
ctggctgaagttgccctaggcaacatgcatgaattgaagaaggcctcccacatcacaaaa
ctacctaagggcaagcacagtgttaaaggtttgggccgaactgctcctgatccaggtgcc
tctgtcaatttaaacggggtgcaagtgcctctgggaaaaggagtcaacactaacattgat
gacacaagtctactgtacaacgaatacattgtgtatgatgtagcacagatcaacatgaag
tatctcatgaaggtcaagtttaactaccagacatccctgtggtga
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