Scomber scombrus (Atlantic mackerel): 133997512
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Entry
133997512 CDS
T10651
Symbol
nbas
Name
(RefSeq) NBAS subunit of NRZ tethering complex isoform X1
KO
K20473
neuroblastoma-amplified sequence
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Membrane trafficking [BR:
ssco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
133997512 (nbas)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbas_N
NBAS_11th
Sec39
ARM_KNTC1_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
133997512
NCBI-ProteinID:
XP_062293103
LinkDB
All DBs
Position
17:13135435..13291749
Genome browser
AA seq
2371 aa
AA seq
DB search
MAEDSLLEGEDENILYDLLVITEWPPETDTQLRGNKEYNTSLVAKAITGPFRLILHYLWY
SPTSSSLPLGLHRLANKQINWELVLASNGKLLAVVQDQCVEIRSVRDDFGSVIGKCQVPK
DPNPQWRRVAWSHDCTLLAYADSTGTVRLFDLMGSELFVIPPAVSFPGDFSCAVAGLMFL
EYTASTQWSAELLVITYGGGLKSYLVSVGTNQNFQENHSFSFSAHYSRGITSAIYHPAHR
LLLVGGCESGDDSTSKASCYGITAWRTLSGSPHYKQVTSYEDDVNMNQKRAFFKIPSFRL
FPRQGDEKDGVFRMSLSPDGTLLSVIHFSGRLSVWDIPSLKQRATWSQDQQPGFEEINPE
WKTSLERRKKIKDKEQYYPLEDVNWWSDNVLILARCSGSVTVSSVRTLRNLLGKSCEWFE
PSPRVTAAHDGGFLSLECEVKLAQKRGRLESNLSGGASEDEEGDDGGDSDSDDESSAKAR
YFGYIKQGLYYVTEMERFAPPRKRPRTVIKNYRLVSLRSTTPEELYQRKIDNEEYGEALS
LAQAYNLDSDLVYQRQWRKSTVSIASIQDYLSKIRKRSWVLHECVERVPENVDAAKELLQ
YGLKGTDLEALIAIGNREDGGRFIMPGDVDLDDLPYEDMLSDNEELEMKKEKENKKRQEL
LAKVDFSRLTLEQKELCRSRLKLLSYLDRLATYEEILGGPHAAEEKYDAEFFKKFRSQNI
VLSARNYARESNVQALDILFTYHGAELLQHRLAILYNFPETTSPHEYTILLPEACLDDRD
ELVLIPWDEQRHREMDWCETEECRAVLDQNLFDDDSFLYEETSERLRFRTATPSIQLLTD
WYQTRARDIDSCSRQVDCALSLVRLGKEREIPGLELLCDDLVTMETLVYETSCELSLTLK
DLQQLSDIDKLRLLMKNSSTERYVKDAFQWMVPFLHRCEGQKEGAAKALLREYLDSLAQR
DLSLPLIIFQHSKPDCQQKIIGDPDQLMVVALECIYSCERDDQLSLCYDILECLPQRGYG
PETDSTASLHDQVDKLEKHLSVVEVLEKHGLQKPISYVKNSQSSEEEAHQLMIKLCRHTG
RKNPPVSETVWRGLLQDLLDMQQNVYTCLKPEICHQVFVESLLCSSRVENVRLAGQLMHC
STVSQDVPVSLSFRGKVYTLKVAYNNSVELALAAAREYFNSSTTLTDPCMGLARACLQLI
TDCPPAIQEELDLISALSQLEGFSVSILPLQVRLRSDRLSLIKECIADCSTAYKQSTTLL
NLASLLRVAGDDETTRKGQVLTLLAEQALQCLDFKASYIHCQDLMAAGYSPAWEVCSLLG
QCEGYGELDARQELLAFSLTHCPPDNIHGLLAASSDLQTQVLYQAVNYQMEPVITESGPE
ADMTDSLKACTPTVGSSVGTAGDLLHRTTAKTMEVLTTTGVTTKAVLTAVSDHRWWKESL
NYLRPLQGHDAGTSSQGGACENSNLERQGCSPFYQEIIDDSYLDLSQDVYSACRDVPPEN
FAEVLLRTGKLAETKTEGKTPFPATEVLLQLANDAFPRDMMLALSYLLALPQVLDANRCF
EKQCHSALSLQLAAYYYSLQIYTRLMPCFKDKNHSLYQADPKELIRLVTQHVSAYSGWPE
ELQNLINQLQVYNERLTDFTQAQVLQGLGRGVDVQRFSSDSDYKKETILGLTETLDDNVY
RISVSLAKRYSVPLWEVYMTHLEFLFTDSGLSTKDIESRSESLGLFDTLKCNPQAFNSHM
NKYVLPSVEGTDLGRLLYYYTLLEAAGCEHYITTTIKPDSHVKLLKKLQAVAKGLNYRKL
TDESLDPLAALEPVLTSQNVLSISKLANRLPVPGGGGVTVSPSGVHAVWLQKLFWKGDPQ
LLKRPPQSDQDYLHAYDTCAKYLDRLVPADTINFLDSITFSADAAKDLSIQARSEVIKRA
TKALRQLGEKSRKRGGESGGEQEGKDPAGMTFDEALAHLQQSQAHLDTLSHAFILSLKDS
QQEQLQGYSQLYDLSRSERSKVHELAVTMATDGQPLERVGELLSLAVGSLDMSVKSVLHD
AVERVVAALSGDPDALTNYPQPLRVLEAMVTAVHNSVQSGMVTSDDLLAWLSPFCGDASL
PVRPRIDVLQILESNFSLRDSDVRLLLLYRTQAVLKDREIQIEDVENEEKRCTLFLELLE
AAQKWEDFQMLMLLLQAWPPMMKEEVAESEHNPWVLLTSAFLTQCQGSQVKLDLGQQVVT
MVRSLYNTKHKLPAQCIRHIATLLLQDQASHQQPALKLMAESGDEQLLQLTLDQINSMTA
ETASCCDAELLTLLLDARLLVGCVSSPLYPLLSSHMLSHQQEGGWDVEKAAAELLAAGHG
PEAGSLLLAHRGTHQAQFTFNSALAVLKKWL
NT seq
7116 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagatagcttgttagaaggcgaagatgaaaacattttatacgatttacttgtt
attactgaatggccgccagagacggacactcagttgcgaggcaacaaagagtacaacacc
tctcttgttgctaaagccatcacaggcccattccgcttgatcctacactacttgtggtac
agccccaccagctcgtctctgcctcttgggcttcaccgcctggcaaacaagcagatcaac
tgggagctggtgcttgcaagtaatggcaaactgttggcagtggttcaggaccagtgtgtg
gagattaggtctgtgagagatgacttcggctcagtcattgggaagtgccaggtgccaaag
gacccaaacccccaatggcgaagggtggcatggagccacgactgtaccctgctggcctat
gctgacagcaccggcaccgtgcgacttttcgacctcatgggcagcgaactgtttgtcatt
cctccggcggtgagttttcctggagatttcagttgtgcagtggcaggcctgatgttcctg
gagtacacagccagcactcagtggtcagccgagctgctcgttatcacatatggtggcggg
ctcaagagctacttagtcagtgtgggaaccaatcagaacttccaagagaaccacagcttt
agtttctctgcccactactctcgtggcatcacctcagctatttaccaccctgcccaccga
ttgctgctggtggggggatgtgagtcgggggacgacagtacatccaaggcctcttgttat
ggcatcacagcctggaggactctgtctggttcaccgcactacaagcaggtcaccagttat
gaggatgatgtcaatatgaatcagaagagagctttcttcaagatccccagcttcaggctg
tttcccagacaaggagatgaaaaggatggtgtattccgcatgagtctaagccctgatggc
accctgctgtctgtcatccacttctctggtcgcctgtctgtctgggacatcccctcgcta
aaacagagggccacatggagccaagaccaacagccaggatttgaggagatcaatccagag
tggaagacatcgctggagagaaggaaaaaaataaaagataaggagcagtactacccactg
gaggacgtgaactggtggagtgacaacgttttgattctcgctcgctgctctggctctgtc
actgtctcctctgtcaggacgctccgcaatcttctgggcaaatcctgtgaatggttcgaa
ccctcacctcgagtcaccgctgcacatgatgggggctttctcagcctcgagtgtgaggtg
aagctggcccagaagcgtgggcgtctcgagagcaacctgagcggcggagccagcgaggac
gaggagggcgatgatggcggggactctgactcagatgacgagtcctcagccaaagctcgc
tacttcggttacatcaagcagggtctgtattatgtgacggagatggaacgctttgctcca
ccacgcaagcgcccccgcactgtaatcaagaactaccgtcttgtcagcctgaggtcaaca
acaccagaggaactgtaccagaggaagattgacaatgaggaatatggtgaagccttgtcg
cttgcacaagcgtataatctggactctgacctagtctaccaaagacagtggaggaagagt
accgtcagcatcgcgtcgatacaagattatctgagcaagatccgcaagcgttcgtgggtg
ctgcatgaatgtgtggagcgcgtcccagagaatgttgatgcagccaaggagctgctgcag
tatggcctgaagggaacggaccttgaagcactcatagccataggaaacagagaagatggg
ggcaggtttattatgcctggtgatgttgacctggatgacctcccatatgaagacatgctg
tcagacaacgaggagctggagatgaagaaggagaaggaaaacaagaagagacaagagctg
ctggccaaagtcgacttcagcaggctgactctggagcagaaggagttgtgtcggagccga
ctgaaactactctcctacctggaccggctggcaacatacgaggagatactcggcggtcct
catgcagcggaggagaaatatgacgcagagttcttcaagaagttccgcagtcaaaacatt
gttttgtcagcaagaaactacgctagggagagtaacgtgcaggctctggacattctgttc
acgtaccatggagcagaacttctccagcatcggctagctatcctttacaacttcccagaa
accacctctccacacgagtacaccatcttgctgcctgaggcctgcctggatgacagagat
gagttggtgttgattccctgggacgagcagagacacagagagatggactggtgtgagaca
gaggagtgcagagcggtgttggaccagaacctgtttgatgacgacagtttcctgtacgag
gagacttcagaacggctgaggttccgcacggctacaccctccatccagctgctgaccgac
tggtaccagaccagagctcgggatatcgattcctgctccagacaggtggactgtgccttg
tcactggtgcgtcttgggaaggagcgagagatcccagggctagagctcttgtgtgatgac
ttggtcaccatggaaacacttgtgtatgagacatcgtgtgaattgagtctgacactcaaa
gatttgcagcagctcagcgacattgacaagctccgcctgctcatgaaaaattccagcaca
gagcgctatgtgaaagatgccttccagtggatggtgccgtttctgcaccgctgcgaagga
cagaaagagggtgctgctaaagctctgctcagagagtacctggacagcctggcacagcga
gacctcagcctgcccctcatcatcttccagcattccaaacctgactgccagcagaagatc
ataggggacccagaccagctgatggttgttgctctggagtgcatctacagctgtgaaaga
gatgaccaactcagcctctgttatgacatcctggagtgtctgccgcagaggggctacggg
ccagagacagacagcaccgcatcactccatgatcaggtggacaaactagagaagcatctc
agtgtggtggaggttctggagaaacacggcctgcagaagcccatctcatatgtgaagaac
agtcagagcagtgaagaagaagctcaccagctaatgatcaaactgtgccgccacactgga
cgcaaaaaccctccagtgagcgagactgtgtggagagggctgttgcaggatctgctagac
atgcagcagaatgtctacacttgtttaaaaccagaaatatgccaccaggtcttcgtggag
tctctgttgtgctccagtcgtgtggagaacgtacgcctggcagggcaactcatgcactgc
tccacggtcagccaggatgtccctgtcagcttgtctttccgtggtaaagtttatactctg
aaggtggcctacaacaacagcgtagagttagcattggctgctgccagggaatacttcaac
tcctccacaacgctgacggacccctgcatgggcctggccagggcgtgtctccagctgatc
acagactgtcctccagccatccaggaggaactggacctcatcagtgccctcagccagctg
gaaggcttcagcgtcagcatcctgccattgcaagtgcgtctgcggtcagaccgtctgtct
ctgataaaagagtgcatcgccgactgctccaccgcctacaagcagtccaccactctgctg
aatctggcctcacttctcagagttgcaggagatgatgagaccactcgaaaaggccaagtg
ctgaccttgttggcagagcaagctctccagtgtctggacttcaaggcctcctatatccac
tgccaggacctcatggctgcaggttacagtccagcatgggaggtatgcagtctgcttggc
cagtgtgagggttacggagaactggacgcccggcaggagctgttagccttttccctcacc
cactgtccccccgacaacatccacggcctcctggctgcctccagtgacctgcaaactcag
gtgctgtaccaggcagttaactatcaaatggagcctgttattacagagagtggaccagag
gccgacatgacagactctctaaaggcctgcactcccactgtgggctcctctgtgggcaca
gcaggagacttgctgcacagaactacagctaagacaatggaagtattgaccacaacagga
gtgacgaccaaggctgtgctgaccgccgtcagtgatcaccgctggtggaaggaatccctc
aactacctccggcctctgcaaggtcatgatgctgggaccagtagtcaaggaggggcgtgt
gagaactccaaccttgagcgtcaaggctgtagccccttttatcaagaaatcattgatgac
tcctatttagacctgagtcaagatgtgtattcagcctgcagagacgtacctccggaaaac
tttgctgaggttttgctgaggactggtaaactggctgaaaccaaaactgaaggaaaaacc
ccgtttcctgctacagaggttttgctgcagctggccaatgatgcatttcccagggacatg
atgctggctctgtcctacttactggccctgcctcaggtactggatgccaacaggtgtttt
gagaaacagtgtcactctgccttgtccctccagctggctgcctactactactccctgcag
atttacacccgcctcatgccctgcttcaaggacaagaaccactctctctaccaggctgac
ccaaaggagctgattcgattggtcacacagcatgtgtctgcatattcgggttggccggaa
gagctgcagaacttgatcaaccagctgcaggtgtacaacgagcgactgacagactttacg
caggcacaggtgttacagggtctaggccgtggagtggatgtccagcgctttagctccgat
tctgactacaagaaggagaccatcctgggtctcacagagacactggatgacaacgtgtac
agaatctctgtgtctctggctaagcgctacagtgttcctctgtgggaggtctacatgact
cacctcgagttcctctttacagatagcggtctttccactaaggatattgaatcccggagt
gagtccctcggcctgtttgacactttgaagtgtaaccctcaggcatttaacagccacatg
aacaagtatgttctgcccagtgtggagggaacagacctgggccgcctcctctactactat
accttattagaagctgcaggatgtgagcattacatcaccaccaccatcaagccagactca
catgtcaagctgctcaagaagcttcaagctgttgccaaaggcttgaactaccgcaaactg
actgatgaatcactggatccgctggctgctctagaaccagttctgaccagtcagaacgtc
ctgtccatctccaaacttgccaatcgtcttcctgtacctggtggtggaggggtaacagtc
tcccccagtggagtccatgcagtatggctgcaaaagctgttttggaaaggagaccctcag
ttgctgaaaagacctccgcagagtgaccaagactacctccatgcctatgacacctgtgcc
aaatacctggacaggctggttcctgctgacactattaacttcctggatagcattaccttt
tctgcagatgcagccaaggatctgagcattcaggcgaggtcggaggtgataaagcgagcc
accaaagccctgcgccagctgggtgagaagagcaggaagagaggaggcgagagtggcggg
gagcaggaaggaaaggacccagcagggatgacttttgatgaggctctagcacacctgcaa
caatcacaagcccacctggacactctgagccatgccttcattctgtcactcaaagacagc
cagcaggaacagctgcagggttacagtcagctatatgatttgtcccgatctgagaggtca
aaagtacacgagctggcagtcaccatggcaactgatgggcagcctctggagcgcgttgga
gagcttctgagcttggctgtgggatccctggacatgtctgtcaaaagtgtgcttcatgat
gcggtagagagagtagtggctgcactcagtggagacccagacgccttgacaaattaccca
caaccccttagggtcctggaagccatggtgaccgctgtgcacaacagcgtgcagagtggc
atggtgacttcagatgacctgctggcgtggctcagtccattctgcggtgacgcgtcgtta
cctgtgcggcctcggattgatgtgctgcaaatcctggagagtaacttcagcctccgggac
agtgacgttcgtcttctactgctctacagaactcaggctgttctcaaagaccgagagatc
cagatagaagatgtggagaatgaggagaaaagatgtacgctcttcctggagctgttggaa
gctgctcagaagtgggaggactttcagatgctcatgttgctcctacaagcgtggccaccc
atgatgaaagaggaagtggcagagtcggagcataacccctgggtgttgctgacttcagcc
tttctcacccaatgccaggggtcgcaggtcaaactagacctgggtcagcaagtggtcact
atggtgcgatccctctataacaccaaacacaagctccctgcacagtgtatcagacacata
gccactctgctgctccaagaccaagcgagccaccaacagcctgcactcaaactgatggca
gagagcggtgatgagcaactgctgcagctgactctggatcagatcaacagcatgaccgca
gagacagcttcatgctgcgatgccgagctcctgacgttgcttctggacgcaaggctcctg
gtgggctgtgtctcctcgcccctgtaccccctgctcagctcccacatgctgtcccaccag
caggagggaggctgggacgtagagaaagcagccgcagagctgctggcagcaggccatggg
cccgaggcgggctccctgctgctggctcaccgtggaacccaccaggcccagttcaccttc
aactcagccttggccgttcttaagaagtggttgtga
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