Scomber scombrus (Atlantic mackerel): 133997544
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Entry
133997544 CDS
T10651
Symbol
rars2
Name
(RefSeq) probable arginine--tRNA ligase, mitochondrial isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133997544 (rars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssco01007
]
133997544 (rars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssco03016
]
133997544 (rars2)
03029 Mitochondrial biogenesis [BR:
ssco03029
]
133997544 (rars2)
Enzymes [BR:
ssco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
133997544 (rars2)
Amino acid related enzymes [BR:
ssco01007
]
Aminoacyl-tRNA synthetase
Class I (G)
133997544 (rars2)
Transfer RNA biogenesis [BR:
ssco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
133997544 (rars2)
Prokaryotic type
Other AARSs
133997544 (rars2)
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
133997544 (rars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
tRNA-synt_1g
Ins134_P3_kin_N
RQC
Motif
Other DBs
NCBI-GeneID:
133997544
NCBI-ProteinID:
XP_062293162
LinkDB
All DBs
Position
17:20059656..20070437
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AA seq
588 aa
AA seq
DB search
MACFFRRRIAEKLGRTLQQSEDAFIPALSAVPVFKKQQQTADFKLSLNTLRVSGILPSSG
DIQLQTEDLASRLKQDSVVEDVSAGSGVINFRVNRKLLVQKILEPFGKEEDDKFGLNSEL
FNTLKRGTTLVEYSSPNIAKKFHAGHLRSTIIGNFIANLKQSLGNNVIRMNYLGDWGMQF
GLLGAGFGQFGCQEKLKQNPLQHLFEVYVQVNKEAEHNEDMRLAARDFFRQLEQHESQAV
SLWQQFREITVEEYQHVYKRLGVHFDIYSGESFHQHQAQEVVQQLRSQGLLKTTEKGTGV
VDVSPAGDMSNICTVLRSDSTTLYITRDIAAAIDRREKFNFDEMIYVTDKSQANHFHQLF
QILLALGHTWADRCQHVPFGLVQGMKTRIGEVVFLEDVLDEARARMLHNMNQSKTTKEMD
NPEDTAEKVGISALIIQDFKGPLQSDYKFDWDRMLQAQGDTGVFLQYTHARLCSLARRNK
GIEVVEFNPSLLLEQASLSIVQHLLRYDEVLYQSAQDLQPKHLVNFLLKLCHLVASAHRE
LPVKGSPQDVAQNFTPRSFKCCFQKSGVMSPSAAVWLIDVFFWRSTAQ
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtttctttagacgaagaatagcagagaagctgggcaggacgctgcagcagtct
gaggacgccttcataccagctctgtcagcagtgcctgtctttaagaaacaacagcagact
gctgacttcaaactgtctctcaacacgttacgagtcagtggcatcttaccatccagtgga
gacatccagctgcaaacagaagatttggcttctcggttgaagcaggacagtgtggtggag
gatgtatcagctgggagtggagtcatcaacttcagagttaatcgcaaacttctcgtccag
aaaatattggagccatttggaaaggaggaggatgataaatttgggctaaacagtgaactt
tttaataccctgaagagaggaacaacattagtggagtacagctctccaaatattgcaaaa
aaattccatgctggacatttgcgatctacgattattggtaacttcattgctaacctcaag
cagtccctgggaaataatgtcattcgtatgaactacctcggtgactggggtatgcagttt
ggtttgctgggagctggattcggccagtttggatgtcaggagaagttgaaacagaatccc
ttacagcatttgtttgaggtttatgttcaagtgaacaaggaggcagagcacaatgaggat
atgaggctggctgccagagacttctttagacagctggagcaacatgagagccaggctgtg
tcgttatggcaacagttcagagagatcactgtggaagagtatcaacacgtttacaagcgg
ttgggggtccactttgatatttactccggggagtcctttcaccaacatcaagcccaggaa
gtggtgcagcagctgcggagccaaggtctgctgaaaaccactgagaagggaaccggtgtg
gtggatgtctctcctgctggggacatgagcaacatctgcacagtgctgcgcagtgacagc
acaactctctacatcaccagagatatcgctgcagccatcgaccggagagaaaagttcaat
tttgatgagatgatttatgtgacagacaaaagtcaagcaaatcacttccaccagttgttc
cagatccttcttgctttgggacatacttgggctgacagatgtcagcacgtgcccttcggc
ctggtgcagggcatgaagaccaggatcggcgaagtggtgtttctggaggacgtgctggac
gaggcccgagccaggatgctgcacaacatgaaccagtcaaaaacaacaaaggagatggac
aaccctgaggacacagcagagaaagtaggaatcagtgcactaataattcaggacttcaaa
ggtcccctgcagtcagactataagttcgactgggatcggatgctgcaggctcagggagac
acaggcgtcttcctccagtacacgcatgctcgactctgtagtttagcacggaggaataag
ggcatcgaggtggttgagttcaatccatcacttctacttgagcaggcgagcctcagtatt
gtgcagcacctccttcgctatgatgaggtgctgtaccagtcggcccaggatctgcaacct
aaacatctcgtcaactttttattgaagctgtgccacctggttgcctcagcacacagggag
ctgccagtaaaaggaagtcctcaggatgttgcacagaatttcacaccgcggagcttcaag
tgctgctttcagaaatcaggagtcatgtcacccagtgcagcggtgtggctcattgatgtg
tttttttggaggtctacagcacagtaa
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