Scomber scombrus (Atlantic mackerel): 133997556
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Entry
133997556 CDS
T10651
Name
(RefSeq) lymphotoxin-alpha-like
KO
K05477
tumor necrosis factor ligand superfamily member 14
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04060
Cytokine-cytokine receptor interaction
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
133997556
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133997556
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ssco04052
]
133997556
04090 CD molecules [BR:
ssco04090
]
133997556
Cytokines and neuropeptides [BR:
ssco04052
]
Cytokines
Tumor necrosis fators
133997556
CD molecules [BR:
ssco04090
]
Proteins
133997556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Peptidase_M16_C
Motif
Other DBs
NCBI-GeneID:
133997556
NCBI-ProteinID:
XP_062293181
LinkDB
All DBs
Position
2:11219917..11223130
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AA seq
245 aa
AA seq
DB search
MAEDGVGTGPQVFVVDSHANFVSLPSTKKPRWAGVRQKCILPLVGLTLLGLVVEGFFIYQ
LYKKNEALFPPKTSAQQAGPTMGQVGPEVQPHLQHIQQKAFAHLMGPNTVGNTNIVQWVN
EGDAIIYNMSYNNSKLIVKNAGYYYLYSTLQLNAVEKCSLITHKVIRKTKAYGRELELMK
SKSFHCLNPIPSNGKDSDGQDLLQSFLAGIFKLDSEDEIYVTLDNIKKMHPGPTENFMGA
FMISP
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggatggtgtgggtaccggcccccaagtttttgtggtggacagtcacgccaac
tttgtgtcattacccagcacaaagaaaccgaggtgggcaggagtgcgtcaaaagtgcatt
ctcccgctggtgggactgaccctgttgggacttgttgtcgagggatttttcatctaccaa
ctatacaagaaaaacgaggcattgttccctcccaaaacatctgcccagcaggctggacct
acgatgggtcaagtgggacctgaagtgcaaccacatctgcaacatatccaacagaaggcc
tttgctcacctgatgggtcccaacactgtagggaacacaaacattgtgcagtgggtaaat
gagggtgatgccatcatctacaacatgagctacaacaatagcaagttgatagtcaagaat
gcgggatactactacctctactccacactgcaattaaatgctgtagagaagtgttcgctt
atcacgcacaaggtcataagaaaaaccaaggcatatggcagagagctagaacttatgaaa
tcaaaaagtttccactgcttgaaccccataccgtcaaatgggaaggattcagatggccag
gatctgttgcagagtttcctggctgggatcttcaaactggacagtgaagatgaaatttat
gtcacactggataatataaagaagatgcatccaggacccactgaaaacttcatgggggcc
tttatgatatctccttag
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integrated database retrieval system
