Scomber scombrus (Atlantic mackerel): 133997593
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Entry
133997593 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133997593
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133997593
NCBI-ProteinID:
XP_062293235
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Position
17:complement(24688263..24701948)
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AA seq
1127 aa
AA seq
DB search
MDQCEDREEGVPPSKCSLCGEHDSQTRAKRTRRQHRPDSAGPQPEPEPEPEPEPSCVSLK
SDESMHPPLLFKNELSSQTKRKLDQHEPSCVSMKSNSSIEPPLGFNNQHSSQTEMDQESS
EVPSGQSSQQHQTHLDSIFMLLEENIVTFVKNELKKMQKNLSPDYPECLESQREDEEVLD
GEEEEQKRSSREAFLKITLHFLRRMKQEELADCLQSRSPACCRSKLKSNLQKKFQSLFEG
IAKAGNPTLLNQIYTELYITEGGTAEVNAEHEVRQIETASRKPVRPETTIRQEDIFKASP
GRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELNVLKEKKYSL
VELVHHFFTETKEAGICRFEKFRVVFIFDGLDECRLPLDFHNNEILTDVTESSSVDVLLT
NLIRGKLLPSARLWITTRPAAANQIPPECVSMVTEVRGFTNPQKEEYFRKRFRDRKQART
IISHIKTSRSLHIMCHIPVFCWISATVLEDVLKRRKGGELPKTLTEMYIHFLVVQSKLRN
IKYDGGAETDPHWSPESRKMIESLRKLAFEQVQKGNLIFYESDLTECGIDIRAASVYSGV
FTQVFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFIKSGVNLLIEEQTTSQKSETQQE
SAETHLYQSAVDKALRSPNGHLDLFLRFLLGLSLQTNQTFLQGLLTQTGSPSRTNQETVK
YIKKKISENVSAERTINLFHCLNELNDRSLVEEIQQSLRSGSLSTEKLSPAQWSALVFIL
LSSEKDLDVFDLKKYSASEEALLRLLPVVKASNKAVLSDCNLLERSCAALSSVLSSQSSN
LRELDLSNNNLQDSGVERLCAGLESPHCTLKALSLSGCLITEEGCASLASALSSNPSHLR
ELDLSYNHPGDSGEKILSAGVEDPHWSLETLSLQPAGVRWLTPGLRKYFCELTLDPNTAH
RNLKLSDNNRKVTYVKEDQSYPDHPDRFDSMPQLLCRNVLTGRCYWEVEWEGSGLIAVTY
GDISRKGGRPDSWFGGNDQSWSLECSDGGYCVWHDKRGTDPSSPSSSVSNRVAVYVDCPA
GTLSFYKVSSDTLIHLHTFNTTFTQPLYAGFVFWSARFGHTVSLCSL
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaatgctctctgtgtggg
gaacatgacagccagaccagagctaaaagaacaaggaggcagcacagaccagactctgct
ggacctcaacccgaacctgaacctgaacccgaacctgaacccagctgtgtgtccttgaag
agcgatgaatcgatgcatccaccattactcttcaaaaatgaactttcttcacagacaaag
aggaagctggaccaacatgaacccagctgtgtgtctatgaagagcaacagttcgatagag
ccaccattaggcttcaataatcaacattcttcacagacagaaatggatcaggagagctca
gaggttcccagtggtcagtcttcccagcagcatcaaacacacctggactccatatttatg
ctgctggaggagaacatcgtcacttttgtgaagaacgagctgaagaagatgcagaagaat
ctgagtccagattacccagaatgcttagagagtcagagggaggatgaggaggtgttggac
ggtgaggaggaagagcagaagaggagcagcagagaggcatttttgaagatcacactgcac
ttcctgaggagaatgaagcaggaggagttggctgactgtctgcaaagcagaagtcctgca
tgttgtcggtctaaactcaagtctaacctgcagaagaagttccagtctctgtttgagggg
attgctaaagcaggaaacccaacccttctgaatcagatctacacagagctatacatcaca
gagggagggactgcagaggtcaatgctgaacatgaggtcagacagattgaaacagcatcc
aggaaaccagtcagaccagaaacaacaataagacaagaagacatctttaaagcctcacct
ggaagagatgaaccgatcagaacagtgatgacaaagggagtggctggcattgggaaaaca
gtcttaacacagaagttcactctggactgggctgaagacaaagccaaccaggacatacac
ttcacatttccattcactttcagagagctgaatgtgctgaaagagaaaaagtacagcttg
gtggaacttgttcatcacttctttactgaaaccaaagaagcaggaatctgcaggtttgaa
aagttccgggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttc
cacaacaatgagatcctgactgatgttaccgagtccagctcagtggatgtgctgctgaca
aacctcatcagggggaaactgcttccctctgctcgcctctggataaccacacgacctgca
gcagccaatcagatccctcctgaatgtgtcagcatggtgacagaggtcagagggttcact
aacccacagaaggaggagtacttcaggaaaagattcagagataggaagcaggccagaacc
atcatctcccacatcaagacatcacgaagcctccacatcatgtgccacatcccagtcttc
tgctggatctctgctacagttctggaggatgtgttgaaaagaagaaagggaggagagctg
cccaagaccctgactgagatgtacatccacttcctggtggttcagtctaaactgaggaac
atcaagtatgatggaggagctgagacagatccacactggagtccagagagcaggaagatg
atcgagtctctgagaaaactggcttttgagcaggtgcagaaaggcaacctgatcttctat
gaatcagacctgacagagtgtggcatcgatatcagagcagcctcagtgtactcaggagtg
ttcactcaggtctttaaagaggagagagggctgtaccaggacaaggtgttctgcttcgtc
catctgagcgtacaggagtttctggctgctcttcatgtccatctgacattcatcaagtct
ggagtcaatctgctgatagaagaacaaacaacatcccagaagtctgaaactcaacaagaa
tctgcagagacacatctctaccagagcgctgtggacaaggccttacggagtccaaatgga
cacctggacttgttcctccgcttcctcctgggtctttcactgcagaccaatcagactttt
ctacaaggtctgctgacacagacaggaagtccctcaaggaccaatcaggaaacagtcaag
tacatcaagaagaagatcagtgaaaatgtgtctgcagagagaaccatcaatctgttccac
tgtctgaatgaactgaatgatcgttctctagtggaggagatccaacagtccctgagatca
ggaagtctctccacagaaaaactgtctcctgctcagtggtcagctctggtcttcatctta
ctgtcatcagaaaaagatctggacgtgtttgacctgaagaaatactctgcttcagaggag
gctcttctgagactgctgccagtggtcaaagcctccaacaaagctgtcctgtctgactgt
aacctcttagagagaagctgtgcggctctgtcctcagttctcagctcccagtcctctaat
ctgagagagctggacctgagtaacaacaacctgcaggattcaggagtggagcggttgtgt
gctggactggagagcccacactgtacactgaaagctctcagcctgtcaggatgtctgatc
acagaggaaggctgtgcttctctggcatcagccctgagctccaacccctcccatctgaga
gagctggacctgagctacaatcatccaggagactcaggagagaagatcctgtctgctggt
gttgaggatccacactggagtctggaaactctcagcctgcagcctgctggagtccgatgg
ttgacacccgggctgaggaagtatttctgtgaactgacactggatcccaacacagcacac
agaaacctcaaactgtctgataacaacaggaaggtgacctatgtgaaggaggatcagtca
tatcctgatcatccagacagatttgacagcatgcctcagctgctgtgtagaaacgttctg
actggtcgctgttactgggaggtggagtgggaaggaagcggtctgatagcggtgacttac
ggagacatcagcagaaaaggaggcagacctgactcctggtttggagggaatgatcagtct
tggagtcttgagtgttctgatggtggttactgtgtctggcacgataagagaggaacagac
ccttcttccccatcttcctccgtgtctaacagagtagcagtgtatgtggactgtcctgct
ggcactctgtccttctacaaagtctcttctgacacactgatccacctccacaccttcaac
accacattcactcagcctctgtatgctgggtttgtgttctggtcagccaggtttggtcac
acagtgtctctatgttctctgtag
DBGET
integrated database retrieval system
