KEGG   Scomber scombrus (Atlantic mackerel): 133997672
Entry
133997672         CDS       T10651                                 
Symbol
calm1b
Name
(RefSeq) calmodulin-1b
  KO
K02183  calmodulin
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04020  Calcium signaling pathway
ssco04070  Phosphatidylinositol signaling system
ssco04114  Oocyte meiosis
ssco04218  Cellular senescence
ssco04261  Adrenergic signaling in cardiomyocytes
ssco04270  Vascular smooth muscle contraction
ssco04371  Apelin signaling pathway
ssco04625  C-type lectin receptor signaling pathway
ssco04744  Phototransduction
ssco04910  Insulin signaling pathway
ssco04912  GnRH signaling pathway
ssco04916  Melanogenesis
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    133997672 (calm1b)
   04020 Calcium signaling pathway
    133997672 (calm1b)
   04070 Phosphatidylinositol signaling system
    133997672 (calm1b)
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    133997672 (calm1b)
   04218 Cellular senescence
    133997672 (calm1b)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    133997672 (calm1b)
  09152 Endocrine system
   04910 Insulin signaling pathway
    133997672 (calm1b)
   04912 GnRH signaling pathway
    133997672 (calm1b)
   04916 Melanogenesis
    133997672 (calm1b)
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    133997672 (calm1b)
   04270 Vascular smooth muscle contraction
    133997672 (calm1b)
  09157 Sensory system
   04744 Phototransduction
    133997672 (calm1b)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ssco01009]
    133997672 (calm1b)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssco04131]
    133997672 (calm1b)
   03036 Chromosome and associated proteins [BR:ssco03036]
    133997672 (calm1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssco04147]
    133997672 (calm1b)
Protein phosphatases and associated proteins [BR:ssco01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Calcineurin (PPP3/ PP2B)
    Regulatory subunits
     133997672 (calm1b)
Membrane trafficking [BR:ssco04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    133997672 (calm1b)
Chromosome and associated proteins [BR:ssco03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Centriole replication proteins
     133997672 (calm1b)
Exosome [BR:ssco04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   133997672 (calm1b)
SSDB
Motif
Pfam: EF-hand_1 EF-hand_7 EF-hand_6 EF-hand_8 EF-hand_5 EF-hand_9 AIF-1 EH EF_EFCAB10_C SPARC_Ca_bdg EF-hand_11 UPF0154 EFhand_Ca_insen Dockerin_1 Caleosin TerB DUF5580_M FCaBP_EF-hand DUF1103 Poly_export SPEF2_C SurA_N_3 Fe_hyd_lg_C PA_Ig-like
Other DBs
NCBI-GeneID: 133997672
NCBI-ProteinID: XP_062293337
LinkDB
Position
17:complement(8234187..8246410)
AA seq 149 aa
MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
EVDEMIREADIDGDGQVNYEEFVQMMTAK
NT seq 450 nt   +upstreamnt  +downstreamnt
atggctgaccaactaacagaagagcagattgcagagttcaaggaggctttctccttattc
gacaaggatggcgacggcaccatcaccaccaaagagcttggtaccgtcatgaggtcgctg
ggccagaaccccacagaggccgaactgcaggacatgatcaatgaagtggacgctgacggt
aatggaaccattgacttccctgagttcctgaccatgatggccagaaaaatgaaggacaca
gacagcgaggaggagatccgtgaggctttccgggtatttgacaaggatggcaatggctac
atcagcgctgcagagctccgtcacgtcatgacgaacctgggagagaagctaacggacgag
gaggtggacgagatgatcagagaagcagacattgacggagacggacaggtcaactacgaa
gagtttgtacagatgatgactgcaaagtga

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