Scomber scombrus (Atlantic mackerel): 133997781
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Entry
133997781 CDS
T10651
Symbol
arhgef38
Name
(RefSeq) rho guanine nucleotide exchange factor 38
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133997781 (arhgef38)
Membrane trafficking [BR:
ssco04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
133997781 (arhgef38)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
BAR
SH3_9
SH3_1
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
133997781
NCBI-ProteinID:
XP_062293476
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All DBs
Position
2:22016794..22028961
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AA seq
808 aa
AA seq
DB search
MDPKEASGAEKEKEKEKEKVIKRRNRPVFLRYLERRKTDTIVADDMAKSDINLGTLVRRS
QSDKTEYSAKLKEKMTPHDLSVPPSPALDPEEIRLRKMNRRAKVIQELMQTEKDYLTDLE
LCIREVVQPLRNLQIVDIDRLFTNMETVCEVSAALLHRLQEAMADPDPEAVVIGEVFIQA
KAALEDVYKIYCYHHDEANIALKSYEKDEEIKKHFTTCVLALKKIYDQEGKPNLLDMGSL
IIKPVQRIMKYPLLLNELWQATPEDLPDYRPLQEALTAAKIINVNINEFKRRKDIAMKYK
RLEDEGTLRGKLHKFNIHSIRKKGDRFAGYLKILTGVEPQVRDEIFDREEKLFRSLEKAV
RQLVKNVQCYLQHTQEMVSVAVQNIQDMENVVKEPNKNDTNGLSHNNGNDPYKHFKDNME
RLVLAPLSSLQGMFTAPQKLIQKRYDKLLDYCSRLERSSSFSSSSSASTTSSSSSLVSED
PPGPARRDYEALNALLVEELQRFNMAAYTILTNCVVYLVALLRGLTDKILLRSPSIHQLP
APLSNIAEVQNSIMDELNNLTFVKDNAQKLMERKVSFERQRDKKITMPEVQHQTEEQRAW
LLAEYPLSRLYQLKRKCNGCQEQDLSLLEGELVALLEDTDPLGSSSRWLVHTGGTQGYVY
STFLKQYNPLRDSQRAGHMAKEQQQQQQPAMVDEDFDDLSLFVSGSGSSSLLSFSLNTND
SSSTLSGLQGEPESPEDLEDTLDSEAQQFYAVYAFKARCDQELTLQECQHVRILKFCDLG
GNKEWWLAEANGQKGYVPANYLGRMSYA
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaaggaggccagtggggctgaaaaagagaaggaaaaagagaaggagaaagtg
ataaagaggaggaacaggcctgtgttcctgcgctacttggagaggagaaagacggacact
attgtggctgatgacatggccaaaagtgacatcaacctggggacgctggtgaggaggagt
cagtctgacaagacggagtacagcgctaaacttaaagagaaaatgacaccacatgacttg
tcagttcccccctcccctgcactggacccagaggagatccgtttgaggaagatgaaccgc
agggcaaaggtcattcaagagcttatgcagacagagaaggactacctcactgacctggag
ctgtgcatcagagaagtggttcagcctctaagaaacctgcagattgtagatatagatcgg
ctgttcaccaacatggagacagtgtgtgaggtatctgccgcactccttcatagactgcag
gaggctatggctgaccctgatccagaagcagttgttataggagaagtattcatccaggcg
aaggcagctttagaagatgtatataagatttactgttaccatcatgacgaagccaacatt
gcactcaaatcctatgaaaaagacgaagaaataaagaaacatttcaccacgtgtgtatta
gcactgaaaaaaatctatgaccaagaagggaaacccaacttgctggacatgggttcactc
atcatcaaacccgtccagaggatcatgaagtacccattactgcttaatgagctgtggcag
gccacacctgaagacctcccagactatcggccgcttcaagaagctttaactgctgccaag
atcatcaacgttaacatcaatgagttcaagagacgcaaggatatagctatgaagtataag
aggttggaagatgaaggaacattgaggggcaaactacacaagttcaacatccactccatc
cgaaagaaaggtgataggtttgctggctatctcaagatactcactggagtcgaaccacag
gtgagagatgaaatatttgatagagaggagaagctgttcagaagtctggagaaagctgtg
aggcagctggtcaaaaatgtccaatgttacctgcagcacactcaggagatggtgtcggta
gctgttcaaaatatccaggacatggagaatgtcgtcaaggagccaaacaaaaatgacaca
aacggattatcgcacaataatggcaatgacccctataagcactttaaagacaatatggag
cgcttggtcctcgcccctctctcctccctgcagggcatgttcacagccccacagaagctc
atccagaaacgttatgacaaattgctggattactgcagccgcctggagcgctcttcctct
ttttcatcctcatcttccgcatccaccacttcttcctcttcttcactggtgtcagaagac
ccacccggtcctgccaggagggactatgaagctctcaatgccctgctagtagaagagttg
cagaggttcaacatggctgcctatactatcctaaccaactgtgtggtttatcttgtggcc
ttactcagagggctgacagataaaatactactccgctctccatccatacatcagctacca
gctccattgtcaaacattgctgaagtgcagaacagcataatggatgagctgaacaatctg
acttttgtcaaggataatgcgcagaagttaatggagcgaaaagtcagctttgagagacaa
cgagacaagaaaattacgatgccagaggtacagcatcaaactgaggaacagcgtgcctgg
ctgctagcagaatacccactgagccgtctgtaccagttgaagaggaagtgtaatggctgc
caggagcaggacctcagcctgctggagggagagctggtggccctgctggaggacacggac
ccattaggcagtagcagccgctggctggttcacactggaggtacacagggttatgtctac
tccacattcctgaagcagtacaaccctctgagggactcgcagcgggcaggccacatggcc
aaagagcagcaacagcagcagcagcctgccatggtggatgaagacttcgatgacctcagc
ctgtttgtgtcaggcagtggcagcagcagcttgctaagtttcagcctcaacaccaacgac
agcagctcaaccctctctggactgcagggggagccagagagccctgaagacctggaggac
acactggattcagaggctcagcagttctatgctgtgtatgcatttaaagcccgctgtgac
caggagctaaccttgcaggagtgccagcacgtccgcatcctcaagttttgtgaccttgga
ggtaataaggagtggtggttagctgaagctaatggacagaagggatatgtccctgctaac
taccttggcaggatgtcctacgcataa
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