Scomber scombrus (Atlantic mackerel): 133997788
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Entry
133997788 CDS
T10651
Name
(RefSeq) hepatocyte nuclear factor 3-beta-like
KO
K08035
forkhead box protein A2, hepatocyte nuclear factor 3-beta
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133997788
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix developmental regulators
133997788
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Gene cluster
GFIT
Motif
Pfam:
Forkhead
HNF_C
Forkhead_N
Motif
Other DBs
NCBI-GeneID:
133997788
NCBI-ProteinID:
XP_062293480
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Position
17:4250952..4254655
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AA seq
400 aa
AA seq
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MLSAVKMEGHEHPDWSSYYGETECYTAAANMNSGLTMNSVSSYMSAPGITSTGHMNAHSY
MNPVGVSQSSMSTGVSQSPGAVQAGGGMTGLSMSPISQPPYGNVPVMSPVYGQACSIRSR
DPKPYRRSYTHAKPPYSYISLITMAIQQSGCKMLTLNEIYQWIMDLFPFYRQNQQRWQNS
IRHSLSFNDCFIKVPRSADKPGKGSFWALHPDSGNMFENGCYLRRQKRFKSEKSSGSGDK
EPGAKPGSEGGSVPSSGSDSPHSSSSSTSPPTSSADVKGVDLKPCRASPVRVPSPLAHTQ
HLFSHHHHHHHPLLLHEAAHLKPPDHYHPHPHPHPHHYSFNHPFSINNLMSEPQHHKLDP
GVQYGGYGCPVSGALVAAKTGLDPMHTDTNYYHGVYTRGP
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcgcagttaaaatggagggacacgagcatccagactggagcagctactacgga
gagaccgagtgttacaccgcagcagcaaacatgaactccggtctgaccatgaactccgtg
agcagctacatgagcgcgcctggcataaccagcaccggccacatgaacgcacattcctat
atgaacccagttggagtgagccagtcctccatgtccaccggggtttctcagagccccggg
gccgtgcaggctggaggcgggatgactggcctgagcatgagcccgatcagccagccgccg
tacgggaacgtgccggtgatgagcccggtgtacggacaggcctgcagcatcagatccaga
gatccaaaaccgtaccggcggagctacacgcacgccaagccgccgtactcctacatctcc
ctgatcaccatggccatccagcagtccggctgcaagatgctgacgttaaacgagatctac
cagtggatcatggacctgttcccgttttaccggcagaaccagcagcggtggcagaactcc
atcagacactcgctgtcttttaacgactgcttcatcaaggttccccgatccgcggacaaa
ccggggaaaggctccttctgggccctgcacccggactccgggaacatgtttgagaacggc
tgctacctccggcggcagaagcgcttcaagagcgagaagagttccggttcaggtgacaag
gaaccgggggcaaaaccgggctcggagggcggctcggtccccagcagtggatcagactcc
cctcactcctcttcctcctcaacttcccctccgacctccagtgcggatgtaaaaggagtc
gacttaaaaccttgccgcgccagccccgtgcgtgtgccctccccgctcgcgcacacacaa
cacctgttctcccatcatcatcatcatcatcacccgctgctgctgcacgaggccgcccac
ctaaaaccaccggaccactaccaccctcaccctcaccctcaccctcaccactactccttc
aaccacccgttctccatcaacaacctgatgtccgagccgcagcaccacaagctggacccg
ggggtgcagtacggaggctacggctgcccggtgtccggtgcgctggtggcggccaaaacc
ggcctggatcccatgcacaccgacaccaactactaccacggcgtgtacacaagaggcccg
taa
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