Scomber scombrus (Atlantic mackerel): 133997790
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Entry
133997790 CDS
T10651
Symbol
wdr20b
Name
(RefSeq) WD repeat-containing protein 20
KO
K24741
WD repeat-containing protein 20
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
133997790 (wdr20b)
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
133997790 (wdr20b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
EIF3I
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Ge1_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
133997790
NCBI-ProteinID:
XP_062293482
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All DBs
Position
17:complement(11372262..11379507)
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AA seq
638 aa
AA seq
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MAAEGGGKEMNEIKTQFTTREGVYKLLTHSEYSRPNRVPFNSQGSNPVKVSFVNVNDQSG
NGDRICFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNPITATAESVSLLV
GFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVRWVPGSESLFLVAHSSGSMYLYNVE
NTCGTTAPHYQLLKQGENYAVHTCKSKSARNPLLRWTVGEGALNEFAFSPDGKFLACASQ
DGFLRVFGFDAAELHGTMKSYFGGLLCVCWSPDGRYIVAGGEDDLVTVWSFSDCRVIARG
HGHKSWVSVVAFDHCTTSVEDGDPPAEFSGSDEEFHEQIHFGAGRDRANSAHSRLSKRNS
TDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHLPLSRTRTHTNVMSATSPPATGQTTT
TTTVATSTSTTTTTTTTTNPSGTNGKDSVSNSSTSGNPANSLPSTLPRSNSLPHSSNPAG
GSTPNSHTVSSNSSSTKGNSIIDSAFIATGVSKFATLSLHDSRKERHEKDHKRNHSMGHI
SSKSSDKLNQLSSSRTAKTDAAKTLGTMLCPRMEDVPLLEPLVCKKIAHERLTVLIFLED
CLVTACQEGFVCTWARPGKVGLLSSQNNPANSPSGTVV
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagggaggagggaaggagatgaacgaaattaaaactcaattcaccacacgg
gaaggtgtctacaaactccttactcactccgaatacagccgcccgaacagggtgcctttc
aactcgcagggctccaaccccgtcaaggtctccttcgtcaatgtaaacgaccagtccggc
aacggcgacaggatctgcttcaatgtgggccgggagctctacttttatatctacaaaggc
gtgaggaaggctgctgatcttagtaagcccatagacaagaggatatacaaaggaacgcag
cccacatgtcatgacttcaaccccatcacggctacagcagagagcgtctccttgctggtg
ggtttctcagcgggccaggtgcagctcatagacccaataaagaaggaaaccagcaagctc
ttcaatgaagagaggcttatagacaagtcacgagtaacatgcgtacgatgggttcctggt
tcggagagcctgtttttggtggctcattccagtggcagcatgtatttgtacaacgtggaa
aacacctgtggcaccacggcacctcattaccagctcctcaagcagggtgaaaactatgct
gtgcatacctgcaagagcaagtcagcccgcaaccccttactgcggtggacagtgggtgaa
ggggcactcaacgagtttgctttctccccggatggaaagtttttggcttgtgcgagccag
gatggcttccttcgggtgtttggctttgatgcagcagagctccatggaacaatgaagagc
tactttgggggcttactgtgcgtgtgttggagcccagatggacggtatattgtggcagga
ggggaggacgacctagtgactgtgtggtcgttttcagactgcagggtgatcgcacggggg
cacggtcacaagtcgtgggttagcgtggtggcatttgaccactgcaccaccagtgtagaa
gacggtgaccccccggctgagttcagtggtagtgatgaggagttccatgagcagattcac
tttggtgcgggcagagacagagctaacagcgctcattctcggctttctaagagaaactct
acagacagcaggcctgttagtgtgacctaccgatttggttcagtgggccaggatactcag
ctgtgtctgtgggaccttactgaggacatactcttccctcaccttcctttgtcccgtact
aggactcacactaatgttatgagtgccacaagccctccagccactggacaaactactacg
actactactgtagccacttccacctccaccaccaccaccaccactaccaccactaatcct
agtggcaccaatggtaaggacagtgtgagcaatagtagcaccagtggcaacccagctaac
tccctcccaagcaccctgcctcggtccaacagcttgccacactcctccaacccagcaggg
ggcagcacccccaacagtcacacagtcagcagcaacagcagcagcaccaagggcaacagc
atcatcgacagtgctttcattgccaccggcgtcagcaagtttgcaacgctgtcgttacac
gactcgcgcaaggagcgccacgagaaggaccataagagaaaccacagcatgggtcacatc
agcagcaagagcagtgacaagctcaaccagctgagctcatcacggactgcaaaaactgac
gcagcaaagactctgggcactatgctttgcccgcgcatggaggacgtgccgctgctcgag
ccgctggtgtgcaagaaaatcgcccacgagagactcactgtgttaatcttccttgaggac
tgtctggtaacagcctgtcaggagggtttcgtttgcacatgggctaggcccgggaaagtg
ggattgctatcatctcaaaacaacccagccaactcccccagtggaacagtagtatag
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