Scomber scombrus (Atlantic mackerel): 133997811
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Entry
133997811 CDS
T10651
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssco03400
]
133997811
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
133997811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
133997811
NCBI-ProteinID:
XP_062293507
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All DBs
Position
17:complement(17166767..17173101)
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AA seq
929 aa
AA seq
DB search
MGVHDLWSIVEPVCESVPLYSLSRKTLAVDLSLWVCEAQHVQAMMGRVTKPHLRNLFFRV
SSLTLMGVKLVFVMEGDAPKLKAETMSKRTEKRYGGFKKAAAAAPKCTTSTGRGRFKAVL
RECAEMLDYLGVPWVTAVGEAEAMCAYLDSQGLVDGCITNDGDAFLYGARTVYRNFNMNS
KDPQVDCYRTSRVQTELNLSRENLVGLAVLLGCDYIPKGIPGVGKEQALKLIQTIKGQTL
LQRFIQWKEDNAGVSEGVVKKVTHCHVCRHPGSAKAHERSGCVLCDSKQFCQPQDFDYQC
PCDWHRHERTRQALSVEANVRKKTLANQQFPFTEIISEFLVSKDTPVSHLKRRQPNMLLI
QKFAYDKMEWPKHYTSEKVLVLMTYAELMNRKYGREMSSQIKPLRIFKPRVRNAIACFEV
SWSTPAHYVFPEDRPVEDQCEVRTVEEESLFRVAFPEVVESYLRDKALAEENKTKKRKPK
SKKEKPEGSDNISDLLAQMTLQSSSLATATIQPPTLLPTVSVQKDEVVVLDTPVNHKQHQ
KQKETCSALGDCPNTPVSHADSEAASPSVSVVIDALHLSDIDWDALSFTSSPPPPQTAPN
PTTDTKPSKTENEKENTKLKTSSDIKQAESKAAPELCYTECPLRDRVLMRNTAKAMNQMD
IHKDVVSKQLNYELPSLECVSSHNSNLKPNAQISIKDSDHSKLSGKESAVKKEPLTNKGQ
CVTNKAEKETHTSTQQSILAVQAQSKTKDTKKPPHKYKFVRTAIISSAAPPQRCHSDPGN
SDKDRNMPKTTKKSVCMSLCSSSEDSDTENQQLGPQRKTKIKPINKIKGRLLLDFPLKPV
SKTGKPMANTAHSVQLGPKSQRQSVDVKINSVPVSTTSKCQEVPAASVHDDVFLQTPSSP
VIVSDSDDSVICSESPLPLAERLRLKFLK
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcacgatctgtggtctatcgtggagccggtttgtgagtcggttccgctgtac
agtctgagtagaaagacgcttgcagttgacctgagtttgtgggtgtgcgaggcccaacat
gttcaagcaatgatggggagagtcaccaagccccacctcaggaatctatttttcagggtg
tcttctctcactctaatgggggtgaagctggtctttgtcatggaaggagatgcccctaaa
ctcaaagcagaaactatgagcaagaggacagaaaaaagatatggaggatttaaaaaggct
gctgctgctgcccctaagtgcacaacaagcaccggtagagggcgctttaaagctgtgctc
agagagtgtgcagagatgttggactatctgggtgtgccatgggtgacagctgtaggggag
gccgaggccatgtgtgcatatctggattcacaaggcctggtggacggctgcatcaccaat
gatggagatgctttcttatatggagcccggactgtctacaggaacttcaatatgaactct
aaagatcctcaggtggactgttacaggacttcccgtgttcaaacagaattaaatctctcc
agagagaatcttgttggtctggccgtccttcttggttgtgattatattcctaagggcata
ccaggagttggtaaagagcaagctctgaagctcatccagacaatcaaaggacagacactt
ctgcagaggttcatccagtggaaagaggataatgcaggtgtgtctgagggagtcgtaaag
aaggttactcactgccacgtttgtcgacatcctggctcagcaaaggcacatgaacgtagt
ggctgcgtgctctgcgacagtaaacaattctgtcaacctcaggattttgattaccagtgt
ccctgtgactggcaccgccatgaacggacccgccaagctttgtcagttgaggcaaacgtc
aggaagaaaacactggcaaaccaacagttcccttttacagagattattagtgagtttctg
gtttccaaggatacgcctgtgtcacatttaaagaggagacagccaaatatgctgttaata
cagaaatttgcctacgacaagatggagtggccaaagcactacaccagtgaaaaggttcta
gttttgatgacctacgcagagctgatgaacagaaaatatggaagagagatgtcttcacaa
atcaaacccctacgaatatttaaaccaagagtgaggaacgcaatcgcttgcttcgaagtc
agctggagcacaccagctcattacgtctttcctgaggatcggcctgtggaggatcagtgt
gaggtgaggacagtggaggaagagtctctctttcgtgtggccttcccagaggtggtagag
agctacctgagggacaaagctctggctgaagagaacaagacaaagaagaggaaaccaaag
agtaaaaaggagaagccagagggatctgataatatttctgacctcttggctcagatgacc
cttcagagttcctctttggcaaccgctactattcaaccaccaacgctgctgccgactgtt
tcagttcaaaaagatgaagtggtggttttggacactccagtgaaccataaacagcatcaa
aaacagaaagaaacctgcagtgccctgggtgactgtcccaacactcctgtgtctcatgct
gactcagaggctgcttcaccttctgtctcagttgttatcgacgcactgcacctgagtgat
atcgactgggatgccttgtccttcacatcttccccacctcctccacaaacggcacctaac
cccaccacagatactaaaccaagcaaaactgaaaatgaaaaagaaaacaccaagctgaaa
acctcaagtgacattaaacaagccgagtccaaagctgctccagagctgtgctacacagaa
tgtcctctaagggacagagtgctcatgagaaacacagccaaagctatgaaccagatggat
atacacaaagatgtggtctcaaaacaactgaactatgagttaccctccctggaatgtgtt
tcgtctcataactcaaacttaaaaccaaacgcacagatctccattaaagacagtgatcac
agtaagttgtcaggaaaggaatcggctgttaaaaaagagccgctcactaataaaggccag
tgtgtaacaaataaggcagaaaaagaaactcacacttcaacacagcagtcaatacttgca
gtacaagctcaaagtaagacaaaggacaccaaaaagcctcctcacaaatataaatttgtc
aggaccgccattatatcatctgctgccccaccacagaggtgccactctgacccaggtaac
agcgacaaagacagaaacatgcccaagaccaccaagaagagcgtgtgtatgagcttgtgt
tcatccagtgaagacagcgacacagagaaccagcagcttggacctcaaagaaagacaaag
atcaaacccataaacaaaatcaagggcagattgcttttagacttccccctgaaacctgtt
tctaagacaggcaaaccaatggcaaacacggctcatagcgtccaattaggaccaaaatct
cagagacagagtgttgatgttaagataaacagcgttcccgtgtcaactacaagcaagtgc
caggaggtcccagcagctagtgtgcacgatgacgtgttccttcagactccatcatcacct
gtcattgtgtcagatagtgatgactcagtgatttgtagtgagagtccgctgccactggca
gagagactgagactgaaattcctgaagtga
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