Scomber scombrus (Atlantic mackerel): 133997840
Help
Entry
133997840 CDS
T10651
Symbol
nfkbiaa
Name
(RefSeq) nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a
KO
K04734
NF-kappa-B inhibitor alpha
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04210
Apoptosis
ssco04620
Toll-like receptor signaling pathway
ssco04621
NOD-like receptor signaling pathway
ssco04622
RIG-I-like receptor signaling pathway
ssco04623
Cytosolic DNA-sensing pathway
ssco04625
C-type lectin receptor signaling pathway
ssco04920
Adipocytokine signaling pathway
ssco05132
Salmonella infection
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
133997840 (nfkbiaa)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
133997840 (nfkbiaa)
04621 NOD-like receptor signaling pathway
133997840 (nfkbiaa)
04622 RIG-I-like receptor signaling pathway
133997840 (nfkbiaa)
04623 Cytosolic DNA-sensing pathway
133997840 (nfkbiaa)
04625 C-type lectin receptor signaling pathway
133997840 (nfkbiaa)
09152 Endocrine system
04920 Adipocytokine signaling pathway
133997840 (nfkbiaa)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133997840 (nfkbiaa)
09171 Infectious disease: bacterial
05132 Salmonella infection
133997840 (nfkbiaa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133997840 (nfkbiaa)
04131 Membrane trafficking [BR:
ssco04131
]
133997840 (nfkbiaa)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
133997840 (nfkbiaa)
Membrane trafficking [BR:
ssco04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
133997840 (nfkbiaa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
ANK_LRRK2
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
133997840
NCBI-ProteinID:
XP_062293541
LinkDB
All DBs
Position
17:complement(8188533..8190942)
Genome browser
AA seq
308 aa
AA seq
DB search
MDVHRVPNHDQMDYNFDNMEPKHGKVLPCQEDRFDSGLDSLKEDELVNEFENICVSMGEE
STHEYEPWRAVVTDDGDTLLHLAIIHEAQDHALQMIKLSHSHPFLNVQNHQRQTALHLAV
ITDQPHLVERLLKAGCDPRLADDSGNTALHIACKKGSLACFGVITQNSQRHLASIVSFPN
YSGHNCLHLASINGFISLVESLIQLGADINAQEQCSGRTVLHLAVDLQNAALVRRLLDLG
ADVNCLNYGGFTPYHLTYGRNNDEIRCQLFDRTAEELRELPESESEDSDMDDLELSEDEL
YDDIKFGK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggacgtccacagagtacctaaccacgatcaaatggattacaacttcgacaacatggag
cccaaacatgggaaagtgctgccttgccaagaggaccgttttgacagcggcctggattcc
ctaaaagaggacgagctggtgaacgagtttgagaacatatgtgtgtccatgggcgaggaa
agcacgcatgaatacgagccttggagagctgtagtgacggacgatggtgacacgcttctc
cacttggccatcattcatgaagcacaagatcatgccctccagatgatcaaattgtctcac
agtcaccccttcctcaatgtacagaaccaccagagacagactgccctccacctagcagtg
atcacagatcagccacacttggtagagagactccttaaagccggatgtgacccacggctg
gccgatgacagcgggaacacagccctccacatcgcctgcaaaaagggctccctcgcctgc
ttcggggtcatcactcagaacagccagcgccacctcgcctccattgtgtctttccccaac
tacagtggacataactgcctccacttggcgtcaattaatggcttcatttcattggtggaa
agtctcattcagctgggtgcagacattaacgcacaggaacaatgcagtggaaggacagtg
ctccatctggccgtagatctccagaacgcagcactggtccgtcgcctccttgacctcggc
gccgacgttaactgcttaaactatggcggattcacaccgtaccacctcacctacggtcgt
aacaacgacgagatccgctgccaattgtttgataggacggcagaggagctgagggagctt
cccgaaagcgaatcggaagatagcgacatggacgacctggagctgtctgaggatgagttg
tacgatgacataaaatttggaaagtaa
DBGET
integrated database retrieval system
