Scomber scombrus (Atlantic mackerel): 133997872
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Entry
133997872 CDS
T10651
Symbol
emilin1a
Name
(RefSeq) EMILIN-1-A
KO
K24246
emilin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
133997872 (emilin1a)
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
133997872 (emilin1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMI
C1q
Collagen
Baculo_PEP_C
DUF1664
DUF7310
FKBP15
Apolipoprotein
CCDC39
Filament
Paralemmin
ATG16
Sec10_N
NPV_P10
Spectrin
Laminin_II
DUF6402
Motif
Other DBs
NCBI-GeneID:
133997872
NCBI-ProteinID:
XP_062293576
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All DBs
Position
17:7070627..7094484
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AA seq
1016 aa
AA seq
DB search
METLFYLLAVMVARFSLGVGYAESSVQTGQRAASRHRNWCAYVVTRTVSCVMEDGVETYV
KPDYQRCTWGQCPRVAYRTYRRPRYKVAYKMVTEMEWKCCHGYSGEDCHDGPKGTTEQKG
VETKEGDSDKVRQLEETINGLTKDLHNMQTTIHGINQRLPGLNGAIVPADAAQPHMKETI
NSIQTKLDHLYNRTQVHDQTLLNINNHLVNGGGNELDGVSKGGGNGGNQLNTLKEEILTE
LERRVSLSCSSCQAGVEDLRRQQQEDRDRIRALEKHISSMDQHLRQSLEISRSETERSKA
CCNTVTELEKRMSDVEVRVTSTASKCEVIKGRLDKELAGTGGGKGRVTEDRFNTRLRDLE
KRVNNTVRKTEQRCTNTGNNMKDTVQRDVTQLRNMVVSRLDDHSSRIGKIELEVAVLGDT
VTDHSRRLSQLENNTTFLDRRLTATTKMCNETCGPSGKGQKTEDTVKTLEWRVVANQDEI
QKFNTRLNDLSVSGDSLSDKVINLEDDVKKIIAVTGKNGERFNRIVTEVENLGRDFEECS
ICRSVKDDLRLLTNTTLTGLGRCQTELTDLRRKVNSGETVCSQVCSNLQEEVGRLREEVE
KCTGQCKNNINDLKDRLDGHTIHSGRLGGDLKSIQGEIAGVMSTFNSINNTLRGLGRTVQ
THGNTLTDLTNTKDNIISEVDKLDKELTDHLDDSKIRFGSLGKEIQIIRSNYVTEVGECR
RSSDGLDRRLSKLEGVCGRFDSVSESLERIKEGLNRHVSGLWSCVNGLNITVMSHGDLID
NIQHVQLETVHSNIHSLNSSVVDLVKEFHDFFEQDFMGPPGLPGPQGETGNRGSPGPVGP
QGRVGPPGRDGRQGPVGPPGLRGEEGPAGSDAHVPRLSFSAALTRPMRSAGTIVFNKVFV
NENNAYNPQTGYFTAPVSGKYFFSGILTGHKNMKIEAVLSKSNTGVARVDSAGYQPEGLE
KPMAEAKHIPGALAVFNIILPMEEGDTVCIDLVTGKLAFSSEPLTIFSGMLLYENI
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggagacgttattttacctgcttgccgtcatggtggcccggtttagtttgggtgtcgga
tatgcggagtccagtgttcagactggacagagagccgcgagcagacacaggaactggtgt
gcctatgtggtgacacgcactgttagctgtgtgatggaggacggggtggagacgtatgtc
aaaccggactaccaacgctgcacctggggccagtgtcctcgagtggcctaccggacatat
aggaggccaaggtataaggtggcgtacaaaatggtgacagagatggagtggaagtgttgc
catggttactctggggaagactgccacgacgggccaaagggaaccactgaacagaaggga
gttgaaaccaaagaaggtgacagtgataaggtcagacagctggaggaaacaatcaatggt
ctgaccaaagacctccacaacatgcagaccaccattcatggcataaaccagaggctgcct
ggtctaaatggggccattgtcccagctgatgcagctcagccacacatgaaagaaactatc
aacagcatccagaccaaactggatcatctctataacagaacacaggtccatgatcagacc
ctgctcaacatcaacaaccatctggtgaacggagggggcaacgaactggatggagtctcc
aaaggaggaggaaatggagggaaccagctgaacactctgaaggaggagatactgacggag
ctggagagaagggtgtctctgtcttgctcttcctgccaggccggtgtggaggatctgagg
cgccagcagcaggaggacagggacaggatcagagccctggagaagcatattagctccatg
gaccagcatctgaggcagagtctggaaatttcccgcagtgagactgagcgctccaaggca
tgctgcaacactgtcactgaactagagaagaggatgtctgatgtggaggtccgggtcacc
tccactgccagcaagtgtgaagtcatcaaaggtcgactggataaagagctagccgggaca
ggtggaggaaagggaagggtgacagaggacaggtttaacaccagactgagagacctggag
aagagggtgaataacacggtgaggaagacggagcagaggtgtactaacaccggaaacaac
atgaaggacacggttcagagagacgtcacacagctgcgcaacatggtagtgagtcggctg
gatgaccacagctccaggattggcaagatagagctggaagtggctgttcttggagacaca
gtgacagaccacagccgacgtttaagccagctggagaacaacacaaccttcctggacaga
aggctaacagcaaccacaaaaatgtgcaatgaaacctgcgggcctagtggaaaaggccag
aagactgaagacaccgtgaaaaccctagaatggagagttgtggccaaccaagacgagatc
cagaagtttaacactagattaaatgatttgtctgtgtcgggtgactcgctgtctgacaaa
gttatcaacttagaagatgatgtcaaaaaaataattgctgtgacagggaagaatggcgaa
cgcttcaaccggattgtcacagaggtggaaaatttgggccgtgattttgaggagtgctct
atatgcaggagtgtaaaggatgatttgcgcttgctcaccaacaccactttgactggcctc
ggcaggtgccagacagaactaacagatctgcggagaaaggtcaactcgggagaaaccgtc
tgctctcaggtgtgctccaaccttcaggaggaggtgggacgacttagagaggaggtggag
aagtgtacgggacagtgcaaaaacaacataaatgatctgaaggatcgcctggatggtcac
actatccacagtggtagattaggaggggatctaaagtccatccaaggagagatagctggg
gtcatgtccacattcaactccattaataacactctgaggggcctaggaaggaccgtacag
acgcatgggaacacactgaccgatctgaccaacaccaaggacaacatcatctctgaggtg
gacaagctggataaggagctgacggatcaccttgatgactcaaagattcgatttggcagc
cttggcaaagaaatccaaataataaggagcaactatgtgacagaagtaggggagtgccga
cggtctagcgatggcctggaccgaagactctccaagctggagggggtgtgcggacgcttt
gactctgtttcagagagcctggagaggatcaaggagggcctgaaccgacatgtgtctggg
ctgtggagctgcgttaatggactcaatatcacagtaatgtctcacggagatcttattgac
aatatacagcatgtccagctggagacagttcactccaacatacacagcctgaactcttca
gtcgtggacttggtcaaggagttccacgatttcttcgaacaagacttcatgggtccacct
ggtctgccaggtccccaaggagagacaggcaatcgtggatccccaggtcccgtaggaccc
caagggagggtgggacctccaggtagagatggtcgtcagggaccagttggacccccaggt
ctcagaggtgaagagggtcctgcagggtctgatgcccacgtaccacgcctttctttctcc
gctgctctgactcgcccgatgagaagcgcaggaaccatcgtgttcaacaaagtctttgtc
aatgaaaataacgcctacaacccccaaacaggttatttcacagctccagtcagtgggaag
tacttcttcagcggcattctgacaggccacaagaacatgaagatcgaggcagtgctgtcc
aagtccaacactggcgtggccagagtggactcagctgggtatcagcctgaaggcctggag
aagccaatggcagaggccaaacacatacctggagctctggctgtcttcaacatcatcctg
cccatggaggaaggggacaccgtctgtatcgacctcgtcactggcaagctggcgttctcc
tctgaacccttgaccatcttcagcgggatgttgctgtacgaaaacatctga
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